RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 CHST5Q9GZS9 411 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 WDR13Q9H1Z4 485 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 RHOFQ9HBH0 211 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 CNOT1A5YKK6 2376 aaKnown RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 hCG_1809904A0A1W2PP81 198 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A1W2PPE2 198 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A1W2PR64 198 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A1W2PRV1 198 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 PGA3P0DJD8 388 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 LGALSLQ3ZCW2 172 aaPredicted RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 C19orf48Q6RUI8 117 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 UQCC3Q6UW78 93 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 SCCPDHQ8NBX0 429 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 ABHD3Q8WU67 409 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 LHX4Q969G2 390 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A0J9YW62 118 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 PIN1P1O15428 100 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 CTSDP07339 412 aaPredicted RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 TRIP6Q15654 476 aaKnown RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 TMEM38BQ9NVV0 291 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 ERRFI1Q9UJM3 462 aaPredicted RBP13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 MPC1Q9Y5U8 109 aa13.49□□□□□ -0.25
PCDHA3-202ENST00000532566 A0A1W2PR80 420 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 B4E171 279 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 PNPP00491 289 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 CRHP06850 196 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 ANKRD34CP0C6C1 535 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 TSPAN7P41732 249 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 CLEC18BQ6UXF7 455 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 SLC25A38Q96DW6 304 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 UNQ9370/PRO34162Q6UXP9 181 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 IL34Q6ZMJ4 242 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 HIST2H3AQ71DI3 136 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 TUSC5Q8IXB3 177 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 UBALD1Q8TB05 177 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 BTF3L4Q96K17 158 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 S1PR3Q99500 378 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 ATP23Q9Y6H3 246 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 SDK2Q58EX2 2172 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 OR5AC1P0C628 307 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 MICBQ29980 383 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 TMEM123Q8N131 208 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 ALX4Q9H161 411 aaPredicted RBP13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 GPR35Q9HC97 309 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 URGCP-MRPS24S4R325 110 aa13.48□□□□□ -0.25
PCDHA3-202ENST00000532566 NGFP01138 241 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 MAGEA5P43359 124 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 RPS4XP62701 263 aaKnown RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 INPP5JQ15735 1006 aaPredicted RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 NUFIP2Q7Z417 695 aaKnown RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 OR2H1Q9GZK4 316 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 MRPL22Q9NWU5 206 aaKnown RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 TAAR3PQ9P1P4 343 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 MDFIC2A0A1B0GVS7 189 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CLEC18AA5D8T8 446 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 NPIPB9F8W1W9 429 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 M0R296 226 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 FGF5P12034 268 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 LTBRP36941 435 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 ZNF658BQ4V348 819 aaPredicted RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 ARTNQ5T4W7 220 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 C1orf87Q8N0U7 546 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CLEC18CQ8NCF0 446 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CPEB3Q8NE35 698 aaKnown RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CHAC2Q8WUX2 184 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CRYABP02511 175 aaKnown RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 ACKR3P25106 362 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 TMEM88Q6PEY1 159 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 RASL12Q9NYN1 266 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 TRIM77I1YAP6 450 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CELA2AP08217 269 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 SAP25Q8TEE9 199 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 NTNG2Q96CW9 530 aa13.47□□□□□ -0.25
PCDHA3-202ENST00000532566 C3orf85A0A1B0GTC6 90 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 LYZL6O75951 148 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 IGLV3-19P01714 112 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 CALCRP30988 508 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 EGR4Q05215 589 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 FAM27BQ5VT28 67 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 RBMXL3Q8N7X1 1067 aaKnown RBP13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 TRBV5-7A0A0A0MS05 114 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 CBR1P16152 277 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 PJVKQ0ZLH3 352 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 TEX30Q5JUR7 227 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 TAAR6Q96RI8 345 aa13.46□□□□□ -0.25
PCDHA3-202ENST00000532566 HEATR5BQ9P2D3 2071 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 MS4A18H0YCH9 400 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ACTL6AO96019 429 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 FLI1Q01543 452 aaPredicted RBP13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 MS4A18Q3C1V0 323 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 FAM181AQ8N9Y4 354 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 MITD1Q8WV92 249 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 ERGIC1Q969X5 290 aa13.46□□□□□ -0.26
PCDHA3-202ENST00000532566 FN3KRPQ9HA64 309 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms