RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 SKP2Q13309 424 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 EIF4EBP2Q13542 120 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF774Q6NX45 483 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 TMEM123Q8N131 208 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 ASB10Q8WXI3 467 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 MAP6Q96JE9 813 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 PECRQ9BY49 303 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 AUNIPQ9H7T9 357 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 SEC16AO15027 2179 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 KIF13BQ9NQT8 1826 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 B4E171 279 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 K7ESF4 209 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 TSPAN7P41732 249 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 LPAR6P43657 344 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 GNG10P50151 68 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 B3GNTL1Q67FW5 361 aaPredicted RBP7.51□□□□□ -1.21
CTNND1-225ENST00000530094 VN1R4Q7Z5H5 301 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 CLCF1Q9UBD9 225 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 UBE2L5PA0A1B0GUS4 154 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 OOEPA6NGQ2 149 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 SMIM18P0DKX4 95 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 RANP62826 216 aaKnown RBP7.51□□□□□ -1.21
CTNND1-225ENST00000530094 OR2M7Q8NG81 312 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 OR52L2PQ8NGH6 319 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 RPUSD4Q96CM3 377 aaKnown RBP7.51□□□□□ -1.21
CTNND1-225ENST00000530094 MS4A5Q9H3V2 200 aa7.51□□□□□ -1.21
CTNND1-225ENST00000530094 MYO16Q9Y6X6 1858 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 SCN5AQ14524 2016 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 PLPP2O43688 288 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 FCGR3BO75015 233 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF574Q6ZN55 896 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 C20orf196Q8IYI0 205 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 RASL11BQ9BPW5 248 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 IL36GQ9NZH8 169 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 DCTN6O00399 190 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ADAM20O43506 726 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 FGF9P31371 208 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 AMTP48728 403 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 WDR38Q5JTN6 314 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF425Q6IV72 752 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 INO80CQ6PI98 192 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 FA2HQ7L5A8 372 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 SIRT3Q9NTG7 399 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 KCNE3Q9Y6H6 103 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF716A6NP11 495 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 J3QR89 54 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 KRASP01116 189 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 RHOBP62745 196 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 SLC25A30Q5SVS4 291 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 UQCC3Q6UW78 93 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 TMED6Q8WW62 240 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF275Q9NSD4 429 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 RNF7Q9UBF6 113 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 CES1P1Q9UKY3 287 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 PSG11Q9UQ72 335 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 EP300Q09472 2414 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 RFPL4AA6NLU0 287 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 SHISA8B8ZZ34 492 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 RFPL4AL1F8VTS6 287 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 PNPP00491 289 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 SP1P08047 785 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 MPGP29372 298 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 IL13RA2Q14627 380 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 KLHDC1Q8N7A1 406 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 GMPPAQ96IJ6 420 aaPredicted RBP7.5□□□□□ -1.21
CTNND1-225ENST00000530094 ADGRL4Q9HBW9 690 aa7.5□□□□□ -1.21
CTNND1-225ENST00000530094 C3orf85A0A1B0GTC6 90 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 TMEM272A0A1B0GTI8 110 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 IFNL4K9M1U5 179 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 CDC14BO60729 498 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 LYZL6O75951 148 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 SFT2D2O95562 160 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 PDZK1IP1Q13113 114 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 COL19A1Q14993 1142 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 UBE3DQ7Z6J8 389 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 SLC25A45Q8N413 288 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 SPICQ8N5J4 248 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 TMEM105Q8N8V8 129 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 NFAM1Q8NET5 270 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-225ENST00000530094 CABLES2Q9BTV7 478 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 TDRD6O60522 2096 aaKnown RBP7.49□□□□□ -1.21
CTNND1-225ENST00000530094 GPANK1O95872 356 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 RPS27P42677 84 aaKnown RBP7.49□□□□□ -1.21
CTNND1-225ENST00000530094 OR3A4PP47883 348 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 FAM3AP98173 230 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 PAX5Q02548 391 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 BAMBIQ13145 260 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 KRTCAP3Q53RY4 240 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 CXorf67Q86X51 503 aaPredicted RBP7.49□□□□□ -1.21
CTNND1-225ENST00000530094 TMEM18Q96B42 140 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 MAGT1Q9H0U3 335 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 ZNF665Q9H7R5 613 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 UBTD1Q9HAC8 227 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 ICAM5Q9UMF0 924 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 AHCTF1Q8WYP5 2266 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 SLC38A11Q08AI6 406 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 SMAGPQ0VAQ4 97 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 FABP9Q0Z7S8 132 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 CCDC144NLQ6NUI1 221 aa7.49□□□□□ -1.21
CTNND1-225ENST00000530094 GLDNQ6ZMI3 551 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms