RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 MFNGO00587 321 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 SYNGR1O43759 233 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 GSTP1P09211 210 aaKnown RBP12.24□□□□□ -0.45
TTC39A-216ENST00000530004 BCL3P20749 454 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 SLC6A1P30531 599 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 ACTBP60709 375 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 ACTG1P63261 375 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 SSBP1Q04837 148 aaKnown RBP12.24□□□□□ -0.45
TTC39A-216ENST00000530004 TAF9Q16594 264 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 MSMPQ1L6U9 139 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 PIGYQ3MUY2 71 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 OLFML2AQ68BL7 652 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 VHLLQ6RSH7 139 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 TRAPPC6BQ86SZ2 158 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 TMEM200AQ86VY9 491 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 MKXQ8IYA7 352 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 FBXL14Q8N1E6 418 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 NUDCD2Q8WVJ2 157 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 MRPS24Q96EL2 167 aaKnown RBP12.24□□□□□ -0.45
TTC39A-216ENST00000530004 OR51I2Q9H344 312 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 KCNK7Q9Y2U2 307 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 PKDREJQ9NTG1 2253 aa12.24□□□□□ -0.45
TTC39A-216ENST00000530004 E7EQL1 145 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 H0YL77 283 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 CSF1P09603 554 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 GNG2P59768 71 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 RPS23P62266 143 aaKnown RBP12.23□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF672Q499Z4 452 aaPredicted RBP12.23□□□□□ -0.45
TTC39A-216ENST00000530004 PLET1Q6UQ28 207 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 WDR86Q86TI4 376 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF295-AS1Q8N0V1 137 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 OR10AD1Q8NGE0 317 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF442Q9H7R0 627 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 DUSP13Q9UII6 198 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 ST3GAL6Q9Y274 331 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 FUOMA2VDF0 154 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 J3QT63 122 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 GEMIN2O14893 280 aaKnown RBP12.23□□□□□ -0.45
TTC39A-216ENST00000530004 MLNRO43193 412 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF250P15622 560 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 BCAP31P51572 246 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 PNLIPRP3Q17RR3 467 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 PLA1AQ53H76 456 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 FAM76BQ5HYJ3 339 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 FAAP20Q6NZ36 180 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 LRP11Q86VZ4 500 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 Q8NFD4 153 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 C14orf79Q96F83 325 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 PECRQ9BY49 303 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 PKIBQ9C010 78 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 DPAGT1Q9H3H5 408 aa12.23□□□□□ -0.45
TTC39A-216ENST00000530004 CISD1Q9NZ45 108 aaKnown RBP12.23□□□□□ -0.45
TTC39A-216ENST00000530004 HEATR1Q9H583 2144 aaKnown RBP12.22□□□□□ -0.45
TTC39A-216ENST00000530004 GCN1Q92616 2671 aaKnown RBP12.22□□□□□ -0.45
TTC39A-216ENST00000530004 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.22□□□□□ -0.45
TTC39A-216ENST00000530004 LRP5LA4QPB2 252 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 NAP1L6A6NFF2 107 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 F8VVB4 439 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 F8VWA3 439 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 SSX5O60225 188 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 GIFP27352 417 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 CCR6P51684 374 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 RBM11P57052 281 aaKnown RBP12.22□□□□□ -0.45
TTC39A-216ENST00000530004 IL24Q13007 206 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 NKAPLQ5M9Q1 402 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 SIGIRRQ6IA17 410 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 Q6ZR03 302 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.22□□□□□ -0.45
TTC39A-216ENST00000530004 MCUBQ9NWR8 336 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 NKIRAS2Q9NYR9 191 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF581Q9P0T4 197 aa12.22□□□□□ -0.45
TTC39A-216ENST00000530004 ABCA4P78363 2273 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 TMEM210A6NLX4 147 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 AKR7A2O43488 359 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 PFDN1O60925 122 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 IGHV3-13P01766 116 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 GRPP07492 148 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 MPZP25189 248 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 RCVRNP35243 200 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 FAUP35544 74 aaKnown RBP12.21□□□□□ -0.45
TTC39A-216ENST00000530004 KLF3P57682 345 aaPredicted RBP12.21□□□□□ -0.45
TTC39A-216ENST00000530004 FGF12P61328 243 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 ZNF154Q13106 437 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 ARFRP1Q13795 201 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 ARL6IP1Q15041 203 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 ADIPOQQ15848 244 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 RSBN1Q5VWQ0 802 aaPredicted RBP12.21□□□□□ -0.45
TTC39A-216ENST00000530004 HIST2H2BCQ6DN03 193 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 ELP2Q6IA86 826 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 C6orf201Q7Z4U5 140 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 GVQW1Q8N7I0 195 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 TMEM229BQ8NBD8 167 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 SCCPDHQ8NBX0 429 aa12.21□□□□□ -0.45
TTC39A-216ENST00000530004 DEDD2Q8WXF8 326 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms