RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 ZNF281Q9Y2X9 895 aa11.07□□□□□ -0.64
CAPN1-209ENST00000527469 FBN1P35555 2871 aaKnown RBP11.06□□□□□ -0.64
CAPN1-209ENST00000527469 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 A0A1W2PPH5 198 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 TRIM77I1YAP6 450 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 SPRY1O43609 319 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-209ENST00000527469 MT-ND2P03891 347 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 SFTPBP07988 381 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 TMEM225BP0DP42 221 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 AMY2BP19961 511 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 CEBPDP49716 269 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-209ENST00000527469 WNT4P56705 351 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 KLF17Q5JT82 389 aaPredicted RBP11.06□□□□□ -0.64
CAPN1-209ENST00000527469 C6orf141Q5SZD1 244 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 XAF1Q6GPH4 301 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 USP43Q70EL4 1123 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 SATL1Q86VE3 508 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 FAM58AQ8N1B3 248 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 PARP16Q8N5Y8 322 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 CD177Q8N6Q3 437 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 OR5D18Q8NGL1 313 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 FBLIM1Q8WUP2 373 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 GHSRQ92847 366 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 TMEM106AQ96A25 262 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 SPACA5Q96QH8 159 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 MND1Q9BWT6 205 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 HES4Q9HCC6 221 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 MTCH1Q9NZJ7 389 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 TPRKBQ9Y3C4 175 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 MAB21L2Q9Y586 359 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 KPTNQ9Y664 436 aa11.06□□□□□ -0.64
CAPN1-209ENST00000527469 PNMA8CA0A1B0GUJ8 204 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ATP6V1G2O95670 118 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 CHRM2P08172 466 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 PRKACAP17612 351 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 BCL3P20749 454 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 C21orf33P30042 268 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-209ENST00000527469 SNU13P55769 128 aaKnown RBP11.05□□□□□ -0.64
CAPN1-209ENST00000527469 BPIFB3P59826 476 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 HILS1P60008 231 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ERVK11-1P61568 191 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 PDZK1IP1Q13113 114 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 LAIR2Q6ISS4 152 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 BRD3OSQ6XYD6 125 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 KIR3DL3Q8N743 410 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 SIGLECL1Q8N7X8 197 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ZFP41Q8N8Y5 198 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ZSCAN4Q8NAM6 433 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-209ENST00000527469 TBC1D15Q8TC07 691 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 LHX4Q969G2 390 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 ELL3Q9HB65 397 aaPredicted RBP11.05□□□□□ -0.64
CAPN1-209ENST00000527469 RBFOX1Q9NWB1 397 aaKnown RBP11.05□□□□□ -0.64
CAPN1-209ENST00000527469 TAS2R4Q9NYW5 299 aa11.05□□□□□ -0.64
CAPN1-209ENST00000527469 hCG_1809904A0A1W2PP81 198 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 A0A1W2PPE2 198 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 A0A1W2PR64 198 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 A0A1W2PRV1 198 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 F8VVB4 439 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 F8VWA3 439 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 OGG1O15527 345 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 ANGPTL7O43827 346 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 FCN3O75636 299 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 VENTXO95231 258 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 TK1P04183 234 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 CDK1P06493 297 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 MYF6P23409 242 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 GABRR1P24046 479 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 EEF1B2P24534 225 aaKnown RBP11.04□□□□□ -0.64
CAPN1-209ENST00000527469 RPL31P62899 125 aaKnown RBP11.04□□□□□ -0.64
CAPN1-209ENST00000527469 COL10A1Q03692 680 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 BAMBIQ13145 260 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 RIPK1Q13546 671 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 KISS1Q15726 138 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 KRTAP24-1Q3LI83 254 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 YIF1BQ5BJH7 314 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 DMKNQ6E0U4 476 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-209ENST00000527469 GDPD3Q7L5L3 318 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 PDZD9Q8IXQ8 264 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-209ENST00000527469 LY6G5BQ8NDX9 201 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 C8orf46Q8TAG6 207 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 RGP1Q92546 391 aaPredicted RBP11.04□□□□□ -0.64
CAPN1-209ENST00000527469 TBX15Q96SF7 602 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 C19orf24Q9BVV8 132 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 ANKRD60Q9BZ19 345 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 FAM192AQ9GZU8 254 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 FAM234AQ9H0X4 552 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 SIRPDQ9H106 197 aa11.04□□□□□ -0.64
CAPN1-209ENST00000527469 SH2D1BO14796 132 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 ALX3O95076 343 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 HAND1O96004 215 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 LALBAP00709 142 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 CALCBP10092 127 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 MMP9P14780 707 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 CELP19835 753 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 VHLP40337 213 aa11.03□□□□□ -0.64
CAPN1-209ENST00000527469 NPBWR2P48146 333 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms