RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 TRMT12Q53H54 448 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM128Q5BJH2 165 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF506Q5JVG8 444 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CCDC144NLQ6NUI1 221 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 PWWP2BQ6NUJ5 590 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 RGMBQ6NW40 437 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 LEG1Q6P5S2 330 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM220Q6QAJ8 160 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FIGLAQ6QHK4 219 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM207Q6UWW9 146 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 C19orf35Q6ZS72 473 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 MEPCEQ7L2J0 689 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FA2HQ7L5A8 372 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SYT13Q7L8C5 426 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 DPY19L4Q7Z388 723 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 RTN4RL2Q86UN3 420 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 NR2C2APQ86WQ0 139 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GKN2Q86XP6 184 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SYT12Q8IV01 421 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CPOQ8IVL8 374 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 C1orf174Q8IYL3 243 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 LGI3Q8N145 548 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 KRTCAP2Q8N6L1 136 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 BMPERQ8N8U9 685 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GATSQ8NAP1 163 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR5AN1Q8NGI8 311 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR8S1Q8NH09 359 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4L1Q8NH43 312 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR5K2Q8NHB8 316 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ADAMTS15Q8TE58 950 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 UBTD2Q8WUN7 234 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 AQP3Q92482 292 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SMPDL3BQ92485 455 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FGF11Q92914 225 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTX4Q96A99 478 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ESAMQ96AP7 390 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC25A38Q96DW6 304 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SMIM10Q96HG1 83 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GMPPAQ96IJ6 420 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SEC22AQ96IW7 307 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC35G5Q96KT7 338 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 HARBI1Q96MB7 349 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ADOQ96SZ5 270 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ARHGDIGQ99819 225 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ORAI3Q9BRQ5 295 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 TIMM29Q9BSF4 260 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 RNF126Q9BV68 326 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SCRT1Q9BWW7 348 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC39A8Q9C0K1 460 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CST11Q9H112 138 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC25A51Q9H1U9 297 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 CHST8Q9H2A9 424 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC32A1Q9H598 525 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 GEMIN7Q9H840 131 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZDHHC11Q9H8X9 412 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 A4GALTQ9NPC4 353 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 YAE1D1Q9NRH1 226 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPL16Q9NX20 251 aaKnown RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FLRT3Q9NZU0 649 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRIT1Q9P2V4 623 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 FBXW2Q9UKT8 454 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 UBE2J1Q9Y385 318 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 WDR45Q9Y484 360 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 HS3ST3B1Q9Y662 390 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 WSB1Q9Y6I7 421 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 URGCP-MRPS24S4R325 110 aa4.22□□□□□ -1.73
HMGB1P19-201ENST00000517578 PARP14Q460N5 1801 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGHV2-26A0A0B4J1V2 119 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGSF23A1L1A6 192 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 FBLL1A6NHQ2 334 aaKnown RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SLC22A20A6NK97 555 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 C4orf47A7E2U8 309 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF727A8MUV8 499 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ZNF736B4DX44 427 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 EEF1E1-BLOC1S5C9J1V9 151 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 E5RGE8 158 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 FAM227AF5H4B4 570 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 H3BNC9 293 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 J3QRE1 110 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 M0R129 80 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 M0R1X1 148 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TMPRSS11DO60235 418 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RAMP2O60895 175 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 NPIPB7O75200 414 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 KLF8O95600 359 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CDS2O95674 445 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 MT-ATP6P00846 226 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 HBZP02008 142 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 SRP19P09132 144 aaKnown RBP4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 TACSTD2P09758 323 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGLC2P0DOY2 106 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ACP5P13686 325 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 OMGP23515 440 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 UCP1P25874 307 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 CD40P25942 277 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
HMGB1P19-201ENST00000517578 RPL12P30050 165 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms