RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 CA10Q9NS85 328 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
SCLT1-209ENST00000511426 RCC2Q9P258 522 aaKnown RBP12.95□□□□□ -0.34
SCLT1-209ENST00000511426 INMT-MINDY4F8WBC2 141 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 GEMIN2O14893 280 aaKnown RBP12.94□□□□□ -0.34
SCLT1-209ENST00000511426 RAB3DO95716 219 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 DHFRP00374 187 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 BCL3P20749 454 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 GIFP27352 417 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 ERVK11-1P61568 191 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 ALKBH6Q3KRA9 238 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 TMEM255AQ5JRV8 349 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 SIGIRRQ6IA17 410 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 FAM58AQ8N1B3 248 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 SCCPDHQ8NBX0 429 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 OR10AD1Q8NGE0 317 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 OR4C16Q8NGL9 310 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 NUDCD2Q8WVJ2 157 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 DVL3Q92997 716 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-209ENST00000511426 UPRTQ96BW1 309 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 DIRC2Q96SL1 478 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 SLC25A21Q9BQT8 299 aaPredicted RBP12.94□□□□□ -0.34
SCLT1-209ENST00000511426 MMP28Q9H239 520 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 SCP2D1Q9UJQ7 156 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 BOD1L1Q8NFC6 3051 aa12.94□□□□□ -0.34
SCLT1-209ENST00000511426 DPRXA6NFQ7 191 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 DISC1C4P0D8 188 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ABCD4O14678 606 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 SYNGR1O43759 233 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 SSX5O60225 188 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 PRAF2O60831 178 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 MT-ND4P03905 459 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 CD3DP04234 171 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 PGA5P0DJD9 388 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 CFHR2P36980 270 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 NPBWR2P48146 333 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 TAS2R46P59540 309 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 SRSF7Q16629 238 aaKnown RBP eCLIP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 PIGYQ3MUY2 71 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 RNASE10Q5GAN6 216 aaKnown RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 SPIN3Q5JUX0 258 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 NCMAPQ5T1S8 102 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 RSBN1Q5VWQ0 802 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ALKBH2Q6NS38 261 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 C22orf34Q6ZV56 151 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 WDR86Q86TI4 376 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 HOGA1Q86XE5 327 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 POC1AQ8NBT0 407 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 EMG1Q92979 244 aaKnown RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 PRRT1Q99946 306 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 NRIP2Q9BQI9 281 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 MCUBQ9NWR8 336 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ZDHHC8Q9ULC8 765 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 OR7C1O76099 320 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 NDUFB6O95139 128 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ADH4P08319 380 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 MECP2P51608 486 aaKnown RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 BSPH1Q075Z2 132 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 AGAP6Q5VW22 663 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 SLC22A25Q6T423 547 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ZNF782Q6ZMW2 699 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 Q6ZR03 302 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 C6orf201Q7Z4U5 140 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 CADM3Q8N126 398 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ARRDC1Q8N5I2 433 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 OR10Z1Q8NGY1 313 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 ERGIC1Q969X5 290 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 RIMS4Q9H426 269 aaPredicted RBP12.93□□□□□ -0.34
SCLT1-209ENST00000511426 NUDT15Q9NV35 164 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 DUSP13Q9UII6 198 aa12.93□□□□□ -0.34
SCLT1-209ENST00000511426 POLEQ07864 2286 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 HLA-DMAP28067 261 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 RBM39Q14498 530 aaKnown RBP12.92□□□□□ -0.34
SCLT1-209ENST00000511426 ZNF146Q15072 292 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 BEX5Q5H9J7 111 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 NKAPLQ5M9Q1 402 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 FBXW5Q969U6 566 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 CMSS1Q9BQ75 279 aaKnown RBP12.92□□□□□ -0.34
SCLT1-209ENST00000511426 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 SEBOXQ9HB31 216 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-209ENST00000511426 HES4Q9HCC6 221 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 C12orf4Q9NQ89 552 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 NPDC1Q9NQX5 325 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-209ENST00000511426 TREM2Q9NZC2 230 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 GLS2Q9UI32 602 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 ELF5Q9UKW6 265 aaPredicted RBP12.92□□□□□ -0.34
SCLT1-209ENST00000511426 PIEZO2Q9H5I5 2752 aa12.92□□□□□ -0.34
SCLT1-209ENST00000511426 MEIS3P1A6NDR6 274 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 PEX14O75381 377 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 H2AFB2P0C5Z0 115 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 PRKACAP17612 351 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 TNFSF4P23510 183 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 GATA4P43694 442 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 MAB21L1Q13394 359 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 SHEQ5VZ18 495 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 FAM90A1Q86YD7 464 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms