RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 GSK3AP49840 483 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZP1P60852 638 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GMFBP60983 142 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 NUTF2P61970 127 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SNRPGP62308 76 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PJVKQ0ZLH3 352 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GINS1Q14691 196 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 CEACAM21Q3KPI0 293 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ATPAF1Q5TC12 328 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 FOXB2Q5VYV0 432 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 B3GLCTQ6Y288 498 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 HSD17B13Q7Z5P4 300 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM17Q86X19 198 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF679Q8IYX0 411 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PNKDQ8N490 385 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR1M1Q8NGA1 313 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR13A1Q8NGR1 328 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR13C2Q8NGS9 318 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GPR148Q8TDV2 347 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SNAPC3Q92966 411 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 WDR89Q96FK6 387 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GPX7Q96SL4 187 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SEPHS2Q99611 448 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF184Q99676 751 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GINS4Q9BRT9 223 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GINS3Q9BRX5 216 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 C1QTNF5Q9BXJ0 243 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PAIP1Q9H074 479 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 NUAK2Q9H093 628 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 NCOR1P1Q9H4R4 102 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RLIMQ9NVW2 624 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SDHAF2Q9NX18 166 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PPP1R14DQ9NXH3 145 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PIPOXQ9P0Z9 390 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 EXOSC1Q9Y3B2 195 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 NCOA6Q14686 2063 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SMIM31A0A1B0GVY4 71 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZC3H12DA2A288 527 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ARRDC5A6NEK1 342 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF850A8MQ14 1090 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM233B4DJY2 109 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OIP5O43482 229 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 NDUFS7O75251 213 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RBMXL2O75526 392 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SLC2A10O95528 541 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 CYB5R3P00387 301 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OSMP13725 252 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR3A4PP47883 348 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 HSPA13P48723 471 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF133P52736 654 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GPR50Q13585 617 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MAPK11Q15759 364 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MPV17LQ2QL34 196 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MS4A18Q3C1V0 323 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ASPHD2Q6ICH7 369 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF770Q6IQ21 691 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF322Q6U7Q0 402 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RFPL4BQ6ZWI9 263 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RPS27LQ71UM5 84 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SLC35F2Q8IXU6 374 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ACBD7Q8N6N7 88 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 DRAXINQ8NBI3 349 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 AQP11Q8NBQ7 271 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR2AK2Q8NG84 335 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR10AD1Q8NGE0 317 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SETD6Q8TBK2 473 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OPALINQ96PE5 141 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SCGB3A2Q96PL1 93 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SIRT7Q9NRC8 400 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TVP23BQ9NYZ1 205 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PDP1Q9P0J1 537 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SLC23A1Q9UHI7 598 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ADAM30Q9UKF2 790 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR52A1Q9UKL2 312 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 PCSK5Q92824 1860 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 IGHV3OR16-10A0A075B7F0 116 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TRAV27A0A087WT01 109 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PS18 150 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 DHRS12A0PJE2 317 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZSCAN5BA6NJL1 495 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 G3V2T6 193 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 EI24O14681 340 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 GPX5O75715 221 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF26P17031 533 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 EDNRAP25101 427 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ERP29P30040 261 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 HAAOP46952 286 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 DYNLT3P51808 116 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 HERV-K104P61576 105 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZMYND11Q15326 602 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 SLC9A3R2Q15599 337 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 TIMM50Q3ZCQ8 353 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF660Q6AZW8 331 aaPredicted RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ZAR1Q86SH2 424 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ABHD12Q8N2K0 398 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MS4A15Q8N5U1 240 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 ADAD2Q8NCV1 583 aaKnown RBP2.37□□□□□ -2.03
CLOCK-209ENST00000511124 OR2T11Q8NH01 316 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 MYDGFQ969H8 173 aa2.37□□□□□ -2.03
CLOCK-209ENST00000511124 RCN3Q96D15 328 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms