RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 OAFQ86UD1 273 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 OR5AP2Q8NGF4 316 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 GRPEL2Q8TAA5 225 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 NEIL3Q8TAT5 605 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 ABHD3Q8WU67 409 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 MARC2Q969Z3 335 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 ST6GAL2Q96JF0 529 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 LINC00477Q96M19 166 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF285Q96NJ3 590 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 BIRC8Q96P09 236 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF300Q96RE9 604 aaPredicted RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 SULT4A1Q9BR01 284 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 FAAP24Q9BTP7 215 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 RPF2Q9H7B2 306 aaKnown RBP3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 TAS2R1Q9NYW7 299 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 DOK5Q9P104 306 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 TP53TG5Q9Y2B4 290 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 BICRAQ9NZM4 1560 aa3.37□□□□□ -1.87
SMARCA5-202ENST00000508573 KIAA1210Q9ULL0 1709 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 SMCHD1A6NHR9 2005 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 TEX48A0A1B0GUV7 120 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 IQCMA0A1B0GVH7 501 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 C12orf77C9JDV5 145 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 MANBAO00462 879 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 STK16O75716 305 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 IGHG1P01857 330 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 THY1P04216 161 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR10J4P0C629 311 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR13C7P0DN81 318 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 DAOP14920 347 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 CXCL2P19875 107 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 CXCL3P19876 107 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 KIR2DS2P43631 304 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 MTPNP58546 118 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ERVFC1-1P60608 527 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 RAB2AP61019 212 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ERVK-16P61578 105 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 CACNG7P62955 275 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 MUC21Q5SSG8 566 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 FAM78BQ5VT40 261 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 SMARCD3Q6STE5 483 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 TMEM205Q6UW68 189 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ALKAL1Q6UXT8 129 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF571Q7Z3V5 609 aaPredicted RBP3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 LRRTM1Q86UE6 522 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 PPP1R27Q86WC6 154 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 C9orf40Q8IXQ3 194 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF567Q8N184 647 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 C1orf158Q8N1D5 194 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ZNF614Q8N883 585 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR2M7Q8NG81 312 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR10AD1Q8NGE0 317 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 OR13C6PQ8NH95 151 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 LHFPL5Q8TAF8 219 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 CD200R1Q8TD46 325 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 LRRC58Q96CX6 371 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 PITX2Q99697 317 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 C2orf88Q9BSF0 95 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 RTBDNQ9BSG5 229 aaPredicted RBP3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 KIFC1Q9BW19 673 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 MROQ9BYG7 248 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 C20orf85Q9H1P6 137 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 DDX31Q9H8H2 851 aaKnown RBP3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 EBF2Q9HAK2 575 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 RGS18Q9NS28 235 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 TMEM100Q9NV29 134 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 TAS2R5Q9NYW4 299 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 ANGPT4Q9Y264 503 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 POLR1DQ9Y2S0 133 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 HSPB11Q9Y547 144 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 V9GY05 133 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 PLEKHG1Q9ULL1 1385 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 PIK3C2GO75747 1445 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 PTPRGP23470 1445 aa3.36□□□□□ -1.87
SMARCA5-202ENST00000508573 MYO15BQ96JP2 1530 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 IGHV3OR16-12A0A075B7B8 117 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RBFOX3A6NFN3 312 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 H7C417 338 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 K7EQD1 137 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MFSD11O43934 449 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 EIF1BO60739 113 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 GALR3O60755 368 aaPredicted RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MOSP00540 346 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RENP00797 406 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 CGAP01215 116 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 MRPL3P09001 348 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 GKN3PP0CG01 181 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 OR5H8P0DN80 308 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RCC1P18754 421 aaPredicted RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 TCN2P20062 427 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 GGT2P36268 569 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 EIF1P41567 113 aaKnown RBP3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 OR1E2P47887 323 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 KLK7P49862 253 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 TCTAP57738 103 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 RHOBP62745 196 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 HIST1H3AP68431 136 aa3.35□□□□□ -1.87
SMARCA5-202ENST00000508573 H3F3AP84243 136 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms