RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ZFP90Q8TF47 636 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 TFGQ92734 400 aaPredicted RBP3.74□□□□□ -1.81
HERC4-213ENST00000506515 SLC38A4Q969I6 547 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 SERPINB12Q96P63 405 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 MCEEQ96PE7 176 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 ALS2CR12Q96Q35 445 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 VAT1Q99536 393 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 RACGAP1Q9H0H5 632 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 TPK1Q9H3S4 243 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 ZNF160Q9HCG1 818 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 ZNF629Q9UEG4 869 aaPredicted RBP3.74□□□□□ -1.81
HERC4-213ENST00000506515 C3orf18Q9UK00 162 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 PSMD13Q9UNM6 376 aa3.74□□□□□ -1.81
HERC4-213ENST00000506515 FLNAP21333 2647 aaKnown RBP3.74□□□□□ -1.81
HERC4-213ENST00000506515 PCM1Q15154 2024 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 IGLV4-69A0A075B6H9 119 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 IGLV3-12A0A075B6K2 115 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 C19orf84I3L1E1 186 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 LIN7AO14910 233 aaPredicted RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 GNAO1P09471 354 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 OMGP23515 440 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 MIPP30301 263 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 MAS1LP35410 378 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 AQP2P41181 271 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 PPOXP50336 477 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 RELAQ04206 551 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 PAFAH1B3Q15102 231 aaKnown RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 HES5Q5TA89 166 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 C9orf135Q5VTT2 229 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 H3F3CQ6NXT2 135 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 METAP1DQ6UB28 335 aaPredicted RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 ABHD13Q7L211 337 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 FAM81AQ8TBF8 368 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 ZNF596Q8TC21 504 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 PSMF1Q92530 271 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 OR5B12Q96R08 314 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 PANX1Q96RD7 426 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 C20orf24Q9BUV8 137 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 CLSTN2Q9H4D0 955 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 NEK6Q9HC98 313 aa3.73□□□□□ -1.81
HERC4-213ENST00000506515 DHCR7Q9UBM7 475 aaKnown RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 KLF13Q9Y2Y9 288 aaPredicted RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 BZW2Q9Y6E2 419 aaKnown RBP3.73□□□□□ -1.81
HERC4-213ENST00000506515 STAB1Q9NY15 2570 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 NSD1Q96L73 2696 aaPredicted RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 IGHV1-45A0A0A0MS14 117 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 EIF3HO15372 352 aaKnown RBP eCLIP3.72□□□□□ -1.81
HERC4-213ENST00000506515 ANGPTL7O43827 346 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 H6PDO95479 791 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 SERPINA5P05154 406 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 PRPS2P11908 318 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 UGT2B7P16662 529 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 RRM2P31350 389 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 FOXN2P32314 431 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 SLC25A11Q02978 314 aaKnown RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 FAM53BQ14153 422 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 POU2AF1Q16633 256 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 ANKRD22Q5VYY1 191 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 CERS6Q6ZMG9 384 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 ZFP2Q6ZN57 461 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 SLC16A14Q7RTX9 510 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 SLC13A5Q86YT5 568 aaPredicted RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 OR5K2Q8NHB8 316 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 RERGQ96A58 199 aaPredicted RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 IMP4Q96G21 291 aaKnown RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 FOPNLQ96NB1 174 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 WFIKKN1Q96NZ8 548 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 EBNA1BP2Q99848 306 aaKnown RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 SELENOSQ9BQE4 189 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 SNRNP25Q9BV90 132 aaKnown RBP3.72□□□□□ -1.81
HERC4-213ENST00000506515 VCXQ9H320 206 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 RAB26Q9ULW5 256 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 NUP210LQ5VU65 1888 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 DNAJC13O75165 2243 aa3.72□□□□□ -1.81
HERC4-213ENST00000506515 A0A075B6Q4 140 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 TRBV11-1A0A0K0K1C0 115 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 LOC285095A0A1B0GVY8 99 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 PFDN6O15212 129 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 SNAI2O43623 268 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 SPAG7O75391 227 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 SRP72O76094 671 aaKnown RBP3.71□□□□□ -1.82
HERC4-213ENST00000506515 KRT14P02533 472 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 ACSM4P0C7M7 580 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 OR56A5P0C7T3 313 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 COX6A1P12074 109 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 CD9P21926 228 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 CDKN2BP42772 138 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 PRLHRP49683 370 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 PPP1CAP62136 330 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 ADARB1P78563 741 aaKnown RBP3.71□□□□□ -1.82
HERC4-213ENST00000506515 TFF3Q07654 80 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 REEP3Q6NUK4 255 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 TMEM205Q6UW68 189 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 TEX43Q6ZNM6 134 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 C16orf47Q6ZP98 133 aaPredicted RBP3.71□□□□□ -1.82
HERC4-213ENST00000506515 HDDC2Q7Z4H3 204 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 GLT6D1Q7Z4J2 308 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 SNX20Q7Z614 316 aa3.71□□□□□ -1.82
HERC4-213ENST00000506515 RPS19BP1Q86WX3 136 aaKnown RBP3.71□□□□□ -1.82
HERC4-213ENST00000506515 NPWQ8N729 165 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms