RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 SFRP4Q6FHJ7 346 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 RAB12Q6IQ22 244 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 SLC22A25Q6T423 547 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF826PQ6ZT77 177 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 C6orf201Q7Z4U5 140 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF573Q86YE8 665 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 OSR2Q8N2R0 312 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 ZNF808Q8N4W9 903 aaPredicted RBP5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 OR2Z1Q8NG97 314 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 OR56B1Q8NGI3 324 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 OR51T1Q8NGJ9 327 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 OR13G1Q8NGZ3 307 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 FCAMRQ8WWV6 532 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 DYRK2Q92630 601 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 HIST1H2AAQ96QV6 131 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 MICU1Q9BPX6 476 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 NRIP2Q9BQI9 281 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 TMEM204Q9BSN7 226 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 URM1Q9BTM9 101 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 PECRQ9BY49 303 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 CXXC4Q9H2H0 198 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 HES4Q9HCC6 221 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 TAAR3PQ9P1P4 343 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 MTFP1Q9UDX5 166 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 POU2F3Q9UKI9 436 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 NOP16Q9Y3C1 178 aaKnown RBP5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 SPEF1Q9Y4P9 236 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 ATP23Q9Y6H3 246 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 PKDREJQ9NTG1 2253 aa5.84□□□□□ -1.47
TOPBP1-203ENST00000503464 DSCAMO60469 2012 aa5.84□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF462Q96JM2 2506 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 A0A0B4J293 547 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 A0A1W2PPR1 153 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 TUBAL3A6NHL2 446 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 WNT9BO14905 357 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 LYRM1O43325 122 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF780AO75290 641 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SCGNO76038 276 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 MT-ND4P03905 459 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 CSTBP04080 98 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 FCER2P06734 321 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 LPLP06858 475 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 GRPP07492 148 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 GSTP1P09211 210 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 EGR1P18146 543 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 DUSP1P28562 367 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 BLVRBP30043 206 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 PRSS3P35030 304 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SNU13P55769 128 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SRSF1Q07955 248 aaKnown RBP eCLIP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 TRIM16LQ309B1 348 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 PLA1AQ53H76 456 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 HACD4Q5VWC8 232 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ZNF57Q68EA5 555 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 FAAP20Q6NZ36 180 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 Q6P435 159 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 BRICD5Q6PL45 260 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 WDR82Q6UXN9 313 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 TGIF2LYQ8IUE0 185 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 GVQW1Q8N7I0 195 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 CELF2-AS1Q8N7Q2 184 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 POC1AQ8NBT0 407 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 CHST4Q8NCG5 386 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 OR4D10Q8NGI6 311 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 C15orf40Q8WUR7 153 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SNAPC3Q92966 411 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 EMG1Q92979 244 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 RAB3CQ96E17 227 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 MRPS24Q96EL2 167 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ELMOD3Q96FG2 381 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 MEGF10Q96KG7 1140 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 S100A13Q99584 98 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SULT4A1Q9BR01 284 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 HDHD3Q9BSH5 251 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SLC22A4Q9H015 551 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ESRP2Q9H6T0 727 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 SCPEP1Q9HB40 452 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 HRASLSQ9HDD0 168 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 RCC2Q9P258 522 aaKnown RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 AK3Q9UIJ7 227 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ST3GAL6Q9Y274 331 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 CACNG2Q9Y698 323 aa5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 USP9XQ93008 2570 aaPredicted RBP5.83□□□□□ -1.48
TOPBP1-203ENST00000503464 ABCA4P78363 2273 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 hCG_2014768A0A024R1R8 64 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 IGKV1D-8A0A087WSZ0 117 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 FAM181BA6NEQ2 426 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 TRAPPC2LH3BP13 241 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 SULT1C2O00338 296 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 SPRY3O43610 288 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 NOS1APO75052 506 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 PDCD6O75340 191 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 TFF1P04155 84 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 CD3EP07766 207 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 ADH4P08319 380 aa5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 ACAA1P09110 424 aaPredicted RBP5.82□□□□□ -1.48
TOPBP1-203ENST00000503464 PRKACAP17612 351 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms