RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 SLC25A42Q86VD7 318 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 HOGA1Q86XE5 327 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 ZNF573Q86YE8 665 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 C17orf78Q8N4C9 275 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CNEP1R1Q8N9A8 125 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TMEM104Q8NE00 496 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 SLC30A7Q8NEW0 376 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 OR56B2PQ8NGI1 322 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 OR4D10Q8NGI6 311 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 OR5A2Q8NGI9 324 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 OR10K1Q8NGX5 313 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TERB2Q8NHR7 220 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 EMG1Q92979 244 aaKnown RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 CMBLQ96DG6 245 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 VRK1Q99986 396 aaPredicted RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 MICU1Q9BPX6 476 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 RTL8AQ9BWD3 113 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 TMPRSS13Q9BYE2 586 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 SPACA1Q9HBV2 294 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CHMP1AQ9HD42 196 aaPredicted RBP5.99□□□□□ -1.45
USP39-219ENST00000496047 TUBG2Q9NRH3 451 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 NECAP2Q9NVZ3 263 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 B3GNT2Q9NY97 397 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 CLCF1Q9UBD9 225 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PRSS50Q9UI38 385 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 PROCRQ9UNN8 238 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 MEMO1Q9Y316 297 aa5.99□□□□□ -1.45
USP39-219ENST00000496047 LOC100509620A0A075B734 347 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 PIGBOS1A0A0B4J2F0 54 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 C1QTNF9BB2RNN3 333 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 E9PLN8 166 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 KLK10O43240 276 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 SPRY1O43609 319 aaPredicted RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 WDR1O75083 606 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 PDCD6O75340 191 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 RP2O75695 350 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 HPXP02790 462 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ZNF35P13682 527 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 CXCL3P19876 107 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ACKR3P25106 362 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 NTF4P34130 210 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 NUP62P37198 522 aaPredicted RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 RBM11P57052 281 aaKnown RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 GNG3P63215 75 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 PMP22Q01453 160 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 HGFACQ04756 655 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 PDZK1IP1Q13113 114 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 MICBQ29980 383 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 MPV17LQ2QL34 196 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 CEACAM21Q3KPI0 293 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 C1QTNF12Q5T7M4 302 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ATPAF1Q5TC12 328 aaPredicted RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 OR52W1Q6IF63 320 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 FAM180AQ6UWF9 173 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 IGFL3Q6UXB1 125 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 UNQ6494/PRO21346Q6UXR6 183 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 GSG1LQ6UXU4 331 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 TFAP2EQ6VUC0 442 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ASCL4Q6XD76 172 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 Q6ZT83 130 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 BEND4Q6ZU67 534 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 C8orf86Q6ZUL3 223 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 Q8IYB0 196 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 C9orf62Q8N4C0 152 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 GVQW1Q8N7I0 195 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ZNF611Q8N823 705 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 CCDC71LQ8N9Z2 235 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 OR4S1Q8NGB4 309 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 OR5AP2Q8NGF4 316 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 OR8H1Q8NGG4 311 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 OR51F2Q8NH61 342 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 NEK7Q8TDX7 302 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ST8SIA4Q92187 359 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 BCL2L2Q92843 193 aaPredicted RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 FBXW5Q969U6 566 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 POM121L2Q96KW2 1035 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 C1orf147Q96MC9 270 aaPredicted RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 DHRS9Q9BPW9 319 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ST6GALNAC5Q9BVH7 336 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ZNF442Q9H7R0 627 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 UBQLN2Q9UHD9 624 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 ST3GAL6Q9Y274 331 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 POLDIP2Q9Y2S7 368 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 KCNK7Q9Y2U2 307 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 AMDHD2Q9Y303 409 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 MAB21L2Q9Y586 359 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 TEP1Q99973 2627 aaKnown RBP5.98□□□□□ -1.45
USP39-219ENST00000496047 SVILO95425 2214 aa5.98□□□□□ -1.45
USP39-219ENST00000496047 FRYQ5TBA9 3013 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 FXYD6-FXYD2A0A087WZ82 144 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 A0A0A6YYD4 124 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 A0A0B4J2A0 478 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 A0A1W2PP11 408 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 PQLC2LA1A4F0 135 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 HMSDA8MTL9 139 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 ZNF732B4DXR9 585 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 SMLR1H3BR10 107 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 H7C1Q1 480 aa5.97□□□□□ -1.45
USP39-219ENST00000496047 RRP8O43159 456 aaKnown RBP5.97□□□□□ -1.45
USP39-219ENST00000496047 ANGPTL7O43827 346 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms