RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ZNF429Q86V71 674 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 FOCADQ5VW36 1801 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 TO15178 435 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 ACTL6AO96019 429 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 KRASP01116 189 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 CD300CQ08708 224 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 LYPD8Q6UX82 237 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 C6orf201Q7Z4U5 140 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 ASB10Q8WXI3 467 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 BCL2L2Q92843 193 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-207ENST00000494090 SEBOXQ9HB31 216 aaPredicted RBP16.99■□□□□ 0.31
COL27A1-207ENST00000494090 UBE2L5PA0A1B0GUS4 154 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 Q56UQ5 140 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 NAA60Q9H7X0 242 aa16.99■□□□□ 0.31
COL27A1-207ENST00000494090 CELA2BP08218 269 aaPredicted RBP16.98■□□□□ 0.31
COL27A1-207ENST00000494090 ANKRD34CP0C6C1 535 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 CSF2RBP32927 897 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 ISXQ2M1V0 245 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 LRRC29Q8WV35 223 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 PTP4A1Q93096 173 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 TMPRSS5Q9H3S3 457 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 RASL12Q9NYN1 266 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 ICAM5Q9UMF0 924 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 FAM90A27PA6NNH2 459 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 SLC37A1P57057 533 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 MESTQ5EB52 335 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 SIGIRRQ6IA17 410 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 C19orf35Q6ZS72 473 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 LYG1Q8N1E2 194 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 OR10V1Q8NGI7 309 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 UCK1Q9HA47 277 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 CLCF1Q9UBD9 225 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 R4GN57 208 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 A0A1W2PPV9 198 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 ONECUT2O95948 504 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 LRFN3Q9BTN0 628 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 CRISPLD2Q9H0B8 497 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 MPZL1O95297 269 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 SEMG1P04279 462 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 CD3EP07766 207 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 CT55Q8WUE5 264 aa16.98■□□□□ 0.31
COL27A1-207ENST00000494090 C3orf85A0A1B0GTC6 90 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 A0A1W2PPQ1 181 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 RAB5AP20339 215 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 ZNF770Q6IQ21 691 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-207ENST00000494090 FRRS1LQ9P0K9 344 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 SLC45A2Q9UMX9 530 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 IL13RA2Q14627 380 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 GGNBP1Q5YKI7 109 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 BTNL3Q6UXE8 466 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 SLC24A4Q8NFF2 622 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 NRTNQ99748 197 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 ERRFI1Q9UJM3 462 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-207ENST00000494090 C10orf35Q96D05 121 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 MRPL22Q9NWU5 206 aaKnown RBP16.97■□□□□ 0.31
COL27A1-207ENST00000494090 M0R296 226 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 ADAM20O43506 726 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 CXorf67Q86X51 503 aaPredicted RBP16.97■□□□□ 0.31
COL27A1-207ENST00000494090 C20orf196Q8IYI0 205 aa16.97■□□□□ 0.31
COL27A1-207ENST00000494090 ZNF320A2RRD8 509 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 RBP4P02753 201 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 SELENOPP49908 381 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 PDCD1Q15116 288 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 ZNF528Q3MIS6 628 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 PRR27Q6MZM9 219 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 LPAR6P43657 344 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 CD226Q15762 336 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 PLAC9Q5JTB6 97 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 APOBEC4Q8WW27 367 aaKnown RBP16.96■□□□□ 0.31
COL27A1-207ENST00000494090 KIF13BQ9NQT8 1826 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 H3BMH7 237 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 LSM6P62312 80 aaKnown RBP16.96■□□□□ 0.31
COL27A1-207ENST00000494090 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.96■□□□□ 0.31
COL27A1-207ENST00000494090 VSTM2AQ8TAG5 236 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 MRPS18AQ9NVS2 196 aaKnown RBP16.96■□□□□ 0.31
COL27A1-207ENST00000494090 TRAV38-1A0A0B4J264 116 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 FCGR3BO75015 233 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 SFTPA1Q8IWL2 248 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 ZDHHC11Q9H8X9 412 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 TCFL5Q9UL49 500 aa16.96■□□□□ 0.31
COL27A1-207ENST00000494090 CYR61O00622 381 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 FCER1GP30273 86 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 SSX8Q7RTT4 187 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 VASH2Q86V25 355 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 PSG11Q9UQ72 335 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 ADAMTSL1Q8N6G6 1762 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 C5orf67F2Z3F1 127 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 D2HGDHQ8N465 521 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 OPRK1P41145 380 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 SKP2Q13309 424 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 TMPRSS13Q9BYE2 586 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 CA10Q9NS85 328 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 IL36GQ9NZH8 169 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 A0A1B0GTQ1 180 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 PAX5Q02548 391 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 SURF2Q15527 256 aaPredicted RBP16.95■□□□□ 0.3
COL27A1-207ENST00000494090 ATP6V1FQ16864 119 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 GVQW1Q8N7I0 195 aa16.95■□□□□ 0.3
COL27A1-207ENST00000494090 CCL17Q92583 94 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms