RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 GABRA1P14867 456 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF92Q03936 586 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 RAB32Q13637 225 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 KCNRGQ8N5I3 272 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 OR5AP2Q8NGF4 316 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 HAS2Q92819 552 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 RTL8AQ9BWD3 113 aa11.58□□□□□ -0.56
HMGN1-216ENST00000486741 OR6C65A6NJZ3 312 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZIC3O60481 467 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 FAM27BQ5VT28 67 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF573Q86YE8 665 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 SLC30A7Q8NEW0 376 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 FBXO17Q96EF6 278 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF488Q96MN9 340 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 TAF9BQ9HBM6 251 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 E9PQ18 207 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ANGPTL6Q8NI99 470 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 IMMP1LQ96LU5 166 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 SIGLEC12Q96PQ1 595 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZFP57Q9NU63 452 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 B3GAT1Q9P2W7 334 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 CADP27708 2225 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 KRBOX1C9JBD0 128 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ST8SIA3O43173 380 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF250P15622 560 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
HMGN1-216ENST00000486741 SUCLG1P53597 346 aaKnown RBP11.57□□□□□ -0.56
HMGN1-216ENST00000486741 C2orf50Q96LR7 162 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 MYO7BQ6PIF6 2116 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 KIR2DS1A0A191URI9 304 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 KLF7O75840 302 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-216ENST00000486741 KIR2DS4P43632 304 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 KIR2DS1Q14954 304 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 CLEC18BQ6UXF7 455 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 C1QL2Q7Z5L3 287 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 CHST5Q9GZS9 411 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 IFT22Q9H7X7 185 aa11.57□□□□□ -0.56
HMGN1-216ENST00000486741 MSTNO14793 375 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 MPC2O95563 127 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-216ENST00000486741 UBE2V2Q15819 145 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 C17orf78Q8N4C9 275 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 RFESDQ8TAC1 157 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 FBXW5Q969U6 566 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 A0A1W2PNV4 684 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 RGS13O14921 159 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 IL2RAP01589 272 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 SP1P08047 785 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 NKX2-1P43699 371 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-216ENST00000486741 BAP18Q8IXM2 172 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 TCTEX1D2Q8WW35 142 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 SSX3Q99909 188 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 SOSTQ9BQB4 213 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 ENY2Q9NPA8 101 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 AK3Q9UIJ7 227 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 AGFG2O95081 481 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 SNRNP70P08621 437 aaKnown RBP11.56□□□□□ -0.56
HMGN1-216ENST00000486741 CST2P09228 141 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 CPN1P15169 458 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 FSTP19883 344 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF260Q3ZCT1 412 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 PHYHD1Q5SRE7 291 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 JMJD6Q6NYC1 403 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-216ENST00000486741 OR5M8Q8NGP6 311 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 OR8U1Q8NH10 309 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 CUL9Q8IWT3 2517 aa11.56□□□□□ -0.56
HMGN1-216ENST00000486741 PCDH15Q96QU1 1955 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 C21orf140B9A014 251 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 LINC01387J3KSC0 135 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 M0R1B8 84 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 NME2P1O60361 137 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 ISG15P05161 165 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 FPR2P25090 351 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 RPL23AP62750 156 aaKnown RBP11.55□□□□□ -0.56
HMGN1-216ENST00000486741 S100A12P80511 92 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 AANATQ16613 207 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 OR14K1Q8NGZ2 314 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SDSLQ96GA7 329 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 CXorf58Q96LI9 332 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 TRAV17A0A0B4J275 112 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SSSCA1O60232 199 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 PDCD6O75340 191 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 DUS4LO95620 317 aaKnown RBP11.55□□□□□ -0.56
HMGN1-216ENST00000486741 IFNA17P01571 189 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 IGHV3-13P01766 116 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 IGHV3-7P01780 117 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 HPNP05981 417 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 CXCL2P19875 107 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 RNPS1Q15287 305 aaKnown RBP11.55□□□□□ -0.56
HMGN1-216ENST00000486741 SSX9Q7RTT3 188 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 PPP1R35Q8TAP8 253 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 RPS4Y2Q8TD47 263 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
HMGN1-216ENST00000486741 ZNF629Q9UEG4 869 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-216ENST00000486741 PROCRQ9UNN8 238 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms