RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 GLIPR1L1Q6UWM5 242 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
CCM2-215ENST00000482714 OR4D6Q8NGJ1 314 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 SLC25A28Q96A46 364 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 MED30Q96HR3 178 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 Q96MF0 132 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 GFI1Q99684 422 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 REG4Q9BYZ8 158 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 FAM192AQ9GZU8 254 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 CST11Q9H112 138 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 FBLN5Q9UBX5 448 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 ITGB1BP2Q9UKP3 347 aa12.85□□□□□ -0.35
CCM2-215ENST00000482714 MAP1AP78559 2803 aaPredicted RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 SMIM31A0A1B0GVY4 71 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 SFTPBP07988 381 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 ARSBP15848 533 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 EGR1P18146 543 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 BCL3P20749 454 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 NPBWR2P48146 333 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 SCAND1P57086 179 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 RAB11BQ15907 218 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 SLC36A1Q7Z2H8 476 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 OR2W3Q7Z3T1 314 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 LINC00596Q86U02 117 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 ANGPTL6Q8NI99 470 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 KCNG3Q8TAE7 436 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 TMEM246Q9BRR3 403 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 WDR13Q9H1Z4 485 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 RNF167Q9H6Y7 350 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 PATZ1Q9HBE1 687 aaKnown RBP12.84□□□□□ -0.35
CCM2-215ENST00000482714 PCDHB10Q9UN67 800 aa12.84□□□□□ -0.35
CCM2-215ENST00000482714 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 GPR37O15354 613 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 CHRM2P08172 466 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 WNT2P09544 360 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 PSG2P11465 335 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 RPS19P39019 145 aaKnown RBP12.83□□□□□ -0.36
CCM2-215ENST00000482714 NPY4RP50391 375 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 VBP1P61758 197 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 NCS1P62166 190 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 IL13RA2Q14627 380 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 FAM201AQ5SY85 155 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 AVPI1Q5T686 147 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 STUMQ69YW2 141 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 NLRC3Q7RTR2 1065 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 OSR2Q8N2R0 312 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 DEFB108BQ8NET1 73 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 WFDC11Q8NEX6 87 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
CCM2-215ENST00000482714 PTX4Q96A99 478 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 RAB39BQ96DA2 213 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 SDSLQ96GA7 329 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 C1orf147Q96MC9 270 aaPredicted RBP12.83□□□□□ -0.36
CCM2-215ENST00000482714 ZNF488Q96MN9 340 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 GAL3ST1Q99999 423 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 ZNF665Q9H7R5 613 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 CEPT1Q9Y6K0 416 aa12.83□□□□□ -0.36
CCM2-215ENST00000482714 CELSR1Q9NYQ6 3014 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 A0A0G2JK05 382 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 ISPDA4D126 451 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A18PA6NE21 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A16PA6NEW6 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A20PA6NIJ5 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A8PA6NJQ4 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A22PA8MWA6 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A12PA8MX19 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A5PA8MXJ8 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 F8VVB4 439 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 F8VWA3 439 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 SH2D1BO14796 132 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 WNT9BO14905 357 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 HTR3BO95264 441 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A15PP0C7V4 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A13PP0C7W8 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A14PP0C7W9 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM90A24PP0C7X0 464 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 CALCBP10092 127 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 LMO1P25800 156 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 PRDX2P32119 198 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 CD80P33681 288 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 SERPINB10P48595 397 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 C2orf76Q3KRA6 126 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 SLC22A6Q4U2R8 563 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 ZNF788Q6ZQV5 615 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 LURAP1LQ8IV03 231 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 ZNF561Q8N587 486 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 CHST4Q8NCG5 386 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
CCM2-215ENST00000482714 NAA50Q9GZZ1 169 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms