RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF616Q08AN1 781 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 EIF2B1Q14232 305 aaKnown RBP5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 CEACAM21Q3KPI0 293 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 AGKQ53H12 422 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 CYBRD1Q53TN4 286 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 TPTE2P1Q5T6R2 138 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 ACSM6Q6P461 480 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM57BQ71RH2 274 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 RTN4RL2Q86UN3 420 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 SGPP2Q8IWX5 399 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 ZDHHC23Q8IYP9 409 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 ZNF596Q8TC21 504 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 RNF141Q8WVD5 230 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 DLX4Q92988 240 aaPredicted RBP5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 EME1Q96AY2 570 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 FAM46AQ96IP4 442 aaKnown RBP5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 HIST1H2AAQ96QV6 131 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 OR10A2Q9H208 303 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 FN3KQ9H479 309 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 HES4Q9HCC6 221 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 PRR13Q9NZ81 148 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 SLC22A13Q9Y226 551 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 TMEM5Q9Y2B1 443 aa5.65□□□□□ -1.5
SPTLC1-205ENST00000477888 hADV38S2A0JD32 116 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 OOSP1A8MZH6 123 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF878C9JN71 531 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 PSPNO60542 156 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 PYCR1P32322 319 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 CEACAM3P40198 252 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 MNDAP41218 407 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 KIR3DL2P43630 455 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 SLC15A1P46059 708 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 GPR12P47775 334 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF121P58317 390 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 GRB2P62993 217 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 GABPB1Q06547 395 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 IFFO1Q0D2I5 559 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 HNF4GQ14541 408 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 FGD3Q5JSP0 725 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 CEP78Q5JTW2 689 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 TEX30Q5JUR7 227 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 CCDC144NLQ6NUI1 221 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 LINC00322Q6ZN03 302 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 RRM2BQ7LG56 351 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 OR5A2Q8NGI9 324 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 CREB3L1Q96BA8 519 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 RSRC1Q96IZ7 334 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 TPD52L3Q96J77 140 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 UBE2E2Q96LR5 201 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 PAIP2Q9BPZ3 127 aaKnown RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 FAM110AQ9BQ89 295 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 GNB4Q9HAV0 340 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 KRCC1Q9NPI7 259 aaPredicted RBP5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 OR14J1Q9UGF5 321 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 LINC00312Q9Y6C7 94 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 PKHD1P08F94 4074 aa5.64□□□□□ -1.51
SPTLC1-205ENST00000477888 DHRS12A0PJE2 317 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 TMEM82A0PJX8 343 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 UNC119BA6NIH7 251 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 C12orf77C9JDV5 145 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 PSMD9O00233 223 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF593O00488 134 aaPredicted RBP5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 HSPA12AO43301 675 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 BRI3O95415 125 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 SPARCP09486 303 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ARSBP15848 533 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 CD34P28906 385 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 KDELR2P33947 212 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 GNB1P62873 340 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 HLA-DRB5Q30154 266 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 OR52W1Q6IF63 320 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 FAM53AQ6NSI3 398 aaPredicted RBP5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 GDPD3Q7L5L3 318 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 OR8H2Q8N162 312 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 TPRX1Q8N7U7 411 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF491Q8N8L2 437 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ASCC1Q8N9N2 400 aaKnown RBP5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 OR56B4Q8NH76 319 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 TMEM109Q9BVC6 243 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ABCG5Q9H222 651 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 KLK15Q9H2R5 256 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 GHITMQ9H3K2 345 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 ANKRD19PQ9H560 264 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 VIPAS39Q9H9C1 493 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 H2AFY2Q9P0M6 372 aaPredicted RBP5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 CD300AQ9UGN4 299 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 GTF2A1LQ9UNN4 478 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 COMMD3-BMI1R4GMX3 469 aa5.63□□□□□ -1.51
SPTLC1-205ENST00000477888 A0A1B0GVY2 172 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 FAM172BPA6NC97 362 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 OR5B21A6NL26 309 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 IDH3BO43837 385 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 NXPH2O95156 264 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 IGLV1-51P01701 117 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 APOC1P02654 83 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 TMEM11P17152 192 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 GDNFP39905 211 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 MECP2P51608 486 aaKnown RBP5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 ISL1P61371 349 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms