RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SCARF2Q96GP6 870 aaPredicted RBP7.56□□□□□ -1.2
LSM5-208ENST00000450169 FOXN4Q96NZ1 517 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 TSPAN32Q96QS1 320 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 RNF150Q9ULK6 438 aa7.56□□□□□ -1.2
LSM5-208ENST00000450169 CHD3Q12873 2000 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 FANCMQ8IYD8 2048 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 TMEM14DPA8MWL7 114 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 RAD51DO75771 328 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 NDUFB8O95169 186 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CNOT4O95628 575 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 GZMHP20718 246 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 HSD11B1P28845 292 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 OR1D2P34982 312 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CSNK1A1P48729 337 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ZNF41P51814 821 aaPredicted RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 CNN1P51911 297 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 CSNK2A1P68400 391 aaPredicted RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 PSG6Q00889 435 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ID2Q02363 134 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 FAM53BQ14153 422 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 TDRG1Q3Y452 100 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 EMC4Q5J8M3 183 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 C1orf140Q5VVS0 124 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 TEX43Q6ZNM6 134 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 FBXL14Q8N1E6 418 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CSNK2A3Q8NEV1 391 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ST6GALNAC5Q9BVH7 336 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 LPAR5Q9H1C0 372 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 RBKSQ9H477 322 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 GNG13Q9P2W3 67 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 EMC9Q9Y3B6 208 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 PAM16Q9Y3D7 125 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 LRP12Q9Y561 859 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 IGKV1D-42A0A075B6H8 117 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 A0A0A6YYD4 124 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CRYM-AS1A6NIL9 109 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 SOCS1O15524 211 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ST8SIA3O43173 380 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 IGHEP01854 428 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ISG15P05161 165 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CTSBP07858 339 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 SFTPDP35247 375 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 SNU13P55769 128 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 ZP2Q05996 745 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 PRDX4Q13162 271 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 UBE2V1Q13404 147 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ARFRP1Q13795 201 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 EXOSC7Q15024 291 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 SHHQ15465 462 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 ZNF74Q16587 644 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 SLC24A5Q71RS6 500 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 C16orf82Q7Z2V1 217 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 MARCH3Q86UD3 253 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 IL22RA1Q8N6P7 574 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 OR2L3Q8NG85 312 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 OR51G1Q8NGK1 321 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 OR10S1Q8NGN2 331 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 BOD1Q96IK1 185 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CIB3Q96Q77 187 aaPredicted RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 OR5B12Q96R08 314 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 VAMP8Q9BV40 100 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CALHM2Q9HA72 323 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 FBLN5Q9UBX5 448 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 CLDN16Q9Y5I7 305 aa7.55□□□□□ -1.2
LSM5-208ENST00000450169 GOLGA4Q13439 2230 aaKnown RBP7.55□□□□□ -1.2
LSM5-208ENST00000450169 LOC105371242A0A075B767 164 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 BLACEA4D250 179 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 K7EQS6 105 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 OR5G3P0C626 314 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 GALR1P47211 349 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 RPL18Q07020 188 aaKnown RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 MPV17LQ2QL34 196 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 FBXW12Q6X9E4 464 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 CMTM1Q8IZ96 169 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 NUS1Q96E22 293 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 VPS25Q9BRG1 176 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 PCGF1Q9BSM1 259 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 VN1R1Q9GZP7 353 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 HIPK2Q9H2X6 1198 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 SEPSECSQ9HD40 501 aaKnown RBP7.54□□□□□ -1.2
LSM5-208ENST00000450169 Q9N2K0 584 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 SLC7A11Q9UPY5 501 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 SLC5A6Q9Y289 635 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 R4GMQ9 66 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 KIF26BQ2KJY2 2108 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 TRAV39A0A0B4J263 110 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 ZFP92A6NM28 416 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 TMEM238C9JI98 176 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 YPEL1O60688 119 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 PITX3O75364 302 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 OR6A2O95222 327 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 MPIG6BO95866 241 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 DBHP09172 617 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 H2BFMP0C1H6 154 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 JMJD7P0C870 316 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 BCL2P10415 239 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 S100A7P31151 101 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 ECI1P42126 302 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 GNMTQ14749 295 aa7.54□□□□□ -1.2
LSM5-208ENST00000450169 MMDQ15546 238 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms