RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 OR10A5Q9H207 317 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 IGFBP3P17936 291 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 SRP14P37108 136 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 VAMP3Q15836 100 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TP53RKQ96S44 253 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 Q9N2K0 584 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PRTFDC1Q9NRG1 225 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PCNX1Q96RV3 2341 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MASP2O00187 686 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 SLC33A1O00400 549 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 TOX3O15405 576 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 SOCS1O15524 211 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ONECUT2O95948 504 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MLF2Q15773 248 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR5C1Q8NGR4 320 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 C16orf52Q8NHV5 167 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RHBDD1Q8TEB9 315 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 AADACP22760 399 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR3A4PP47883 348 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ERVFRD-1P60508 538 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 FOXK1P85037 733 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 HSF1Q00613 529 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZNF573Q86YE8 665 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TXN2Q99757 166 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 NAT8Q9UHE5 227 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MYO16Q9Y6X6 1858 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LINC01553A4QN01 128 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MPPED1O15442 326 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RAD51DO75771 328 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 NKX2-1P43699 371 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZNF157P51786 506 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 TMEM183BQ1AE95 376 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 DCAF10Q5QP82 559 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MRPL52Q86TS9 123 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 MCEMP1Q8IX19 187 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR2C3Q8N628 320 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LHX4Q969G2 390 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ADGRG7Q96K78 797 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ANGPTL4Q9BY76 406 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 NKX2-4Q9H2Z4 354 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MPZL1O95297 269 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TEX38Q6PEX7 206 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR8G5Q8NG78 346 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 C8orf44Q96CB5 159 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 CISD1Q9NZ45 108 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 FBLN5Q9UBX5 448 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TRDCB7Z8K6 153 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PVRP15151 417 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 Q6ZN92 141 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 C5orf24Q7Z6I8 188 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PRSS58Q8IYP2 241 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 CMTM2Q8TAZ6 248 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RPUSD4Q96CM3 377 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZFYVE21Q9BQ24 234 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 GREB1Q4ZG55 1949 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PIGBOS1A0A0B4J2F0 54 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 CHRNA7P36544 502 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RPS21P63220 83 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 TMED7-TICAM2A0A0A6YYA0 188 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ASAH2BP0C7U1 165 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RAB7AP51149 207 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 FAM3BP58499 235 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 SUPT4H1P63272 117 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 QRFPP83859 136 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PLAC9Q5JTB6 97 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PHF3Q92576 2039 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 TMEM230Q96A57 120 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 COX14Q96I36 57 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PKDREJQ9NTG1 2253 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RNF150Q9ULK6 438 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RRP8O43159 456 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 IGHG1P01857 330 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LCATP04180 440 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 FCGR2AP12318 317 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 CHRNB4P30926 498 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ELLP55199 621 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 SP3Q02447 781 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LINC00114Q6XXX2 140 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 UEVLDQ8IX04 471 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 KLHL13Q9P2N7 655 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RIF1Q5UIP0 2472 aaKnown RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 RPL36A-HNRNPH2H7BZ11 118 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ADAM20O43506 726 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TMEM176BQ3YBM2 270 aaPredicted RBP4.43□□□□□ -1.7
HERC1-201ENST00000443617 ANKRD39Q53RE8 183 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 MRGPRGQ86SM5 289 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR4F5Q8NH21 305 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR52N5Q8NH56 324 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 OR4F4Q96R69 305 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 QSER1Q2KHR3 1735 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LOC101059948A0A1B0GTJ6 334 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 LMX1BO60663 402 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZNF217O75362 1048 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 RABIFP47224 123 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 EFNA3P52797 238 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZNF90Q03938 601 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ORAOV1Q8WV07 137 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 TWSG1Q9GZX9 223 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 ZNF442Q9H7R0 627 aa4.43□□□□□ -1.7
HERC1-201ENST00000443617 PLPP3O14495 311 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms