RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 MGAM2Q2M2H8 2515 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 CD1AP06126 327 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 CD36P16671 472 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 GABRA5P31644 462 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 DDOSTP39656 456 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 PMELP40967 661 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 AARDQ4LEZ3 155 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 COMMD2Q86X83 199 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 CATSPERDQ86XM0 798 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 MS4A15Q8N5U1 240 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 ZFP41Q8N8Y5 198 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 FAM216AQ8WUB2 273 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 TECTBQ96PL2 329 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 BCL7BQ9BQE9 202 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 SPXQ9BT56 116 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 FAM206AQ9NX38 181 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 ZNF391Q9UJN7 358 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 DOCK11Q5JSL3 2073 aa7.31□□□□□ -1.24
USP6NL-203ENST00000443016 SMIM31A0A1B0GVY4 71 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 A0A1B0GWJ7 208 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 C5orf63A6NC05 138 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 H3BUI4 141 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 OGG1O15527 345 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 LALBAP00709 142 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 ANOS1P23352 680 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 CFL1P23528 166 aaKnown RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 GTF2A1P52655 376 aaPredicted RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 MFGE8Q08431 387 aaPredicted RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 YIF1BQ5BJH7 314 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 WDR38Q5JTN6 314 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 TMEM244Q5VVB8 128 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 DMKNQ6E0U4 476 aaPredicted RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 FAM57BQ71RH2 274 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 SATL1Q86VE3 508 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 FTMTQ8N4E7 242 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 C3orf56Q8N813 242 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 CCDC54Q8NEL0 328 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 Q8TCH9 128 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 RAB40AQ8WXH6 277 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 REEP6Q96HR9 211 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 TXN2Q99757 166 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 PBOV1Q9GZY1 135 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 RGCCQ9H4X1 137 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 SEPSECSQ9HD40 501 aaKnown RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 C1orf123Q9NWV4 160 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 IGHV3OR16-10A0A075B7F0 116 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 A0A1B0GVI7 797 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 CCDC160A6NGH7 325 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 E9PI62 339 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 SRSF10O75494 262 aaKnown RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 FSTL3O95633 263 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 CD80P33681 288 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 LUMP51884 338 aaPredicted RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 LYSMD2Q8IV50 215 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 SIGLECL1Q8N7X8 197 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 TSEN15Q8WW01 171 aaKnown RBP7.3□□□□□ -1.24
USP6NL-203ENST00000443016 DUX5Q96PT3 197 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 TMED9Q9BVK6 235 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 STUB1Q9UNE7 303 aa7.3□□□□□ -1.24
USP6NL-203ENST00000443016 TRAV38-1A0A0B4J264 116 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 IGHV2-70DA0A0C4DH43 119 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ACTL6BO94805 426 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 FSHBP01225 129 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 TK1P04183 234 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 CD2P06729 351 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ARL3P36405 182 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 NANOS3P60323 173 aaKnown RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 HOXA4Q00056 320 aaPredicted RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 PAX8Q06710 450 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 WDR25Q64LD2 544 aaPredicted RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 LYPD2Q6UXB3 125 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 CLVS1Q8IUQ0 354 aaPredicted RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ELMOD2Q8IZ81 293 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 OR8B12Q8NGG6 310 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 RPS4Y2Q8TD47 263 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 GHSRQ92847 366 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 SGK3Q96BR1 496 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 PAPOLGQ9BWT3 736 aaKnown RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 EXOSC4Q9NPD3 245 aaKnown RBP7.29□□□□□ -1.24
USP6NL-203ENST00000443016 FRRS1LQ9P0K9 344 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 HHLA2Q9UM44 414 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 SSR3Q9UNL2 185 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 TRAV40A0A0B4J280 105 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 A0A0U1RQV5 110 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 KIR2DS1A0A191URI9 304 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 LOC107986453A0A1B0GWG9 222 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 OOEPA6NGQ2 149 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ANXA2P2A6NMY6 339 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 OR4C45A6NMZ5 311 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 LGALS8O00214 317 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 AIREO43918 545 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ZFPL1O95159 310 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 ISG15P05161 165 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 GALP22466 123 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 KIR3DL2P43630 455 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 NPY4RP50391 375 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 FAM3AP98173 230 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 BAMBIQ13145 260 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 SSX1Q16384 188 aa7.29□□□□□ -1.24
USP6NL-203ENST00000443016 KLF17Q5JT82 389 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms