RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 PLATP00750 562 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 KNG1P01042 644 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 POU3F4P49335 361 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 CAV3P56539 151 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 IL13RA1P78552 427 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 UNQ9370/PRO34162Q6UXP9 181 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 IL17RELQ6ZVW7 336 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 LYPD6Q86Y78 171 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 MKXQ8IYA7 352 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 MS4A15Q8N5U1 240 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 CD177Q8N6Q3 437 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 ZSCAN4Q8NAM6 433 aaPredicted RBP15.45■□□□□ 0.06
PTCD3-204ENST00000418628 C8orf46Q8TAG6 207 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 THRSPQ92748 146 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 RFT1Q96AA3 541 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 NEK6Q9HC98 313 aa15.45■□□□□ 0.06
PTCD3-204ENST00000418628 RFPL4AA6NLU0 287 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 RFPL4AL1F8VTS6 287 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 GABRPO00591 440 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 GPR37O15354 613 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 HCKP08631 526 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 FAM157CP0CG43 387 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 PPIAL4GP0DN37 164 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 CPEP16870 476 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 BCL3P20749 454 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 HNF1AP20823 631 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 NPBWR2P48146 333 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 GP2P55259 537 aaKnown RBP15.44■□□□□ 0.06
PTCD3-204ENST00000418628 ZNF367Q7RTV3 350 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 C1QL2Q7Z5L3 287 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 OR52N4Q8NGI2 321 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 DMRTB1Q96MA1 342 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 NUDT16L1Q9BRJ7 211 aaKnown RBP15.44■□□□□ 0.06
PTCD3-204ENST00000418628 CCDC90BQ9GZT6 254 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 RHOFQ9HBH0 211 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 TMEM138Q9NPI0 162 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 RBFOX1Q9NWB1 397 aaKnown RBP15.44■□□□□ 0.06
PTCD3-204ENST00000418628 FOXJ3Q9UPW0 622 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
PTCD3-204ENST00000418628 ATRQ13535 2644 aa15.44■□□□□ 0.06
PTCD3-204ENST00000418628 LOC105371242A0A075B767 164 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 ENSAO43768 121 aaKnown RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 ANGPTL7O43827 346 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 ECDO95905 644 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 EEF1B2P24534 225 aaKnown RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 MAPK3P27361 379 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 EMX1Q04741 257 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 INSL4Q14641 139 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 ZNF146Q15072 292 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 LIPKQ5VXJ0 399 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 CD276Q5ZPR3 534 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 FAHD2BQ6P2I3 314 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 ASCL4Q6XD76 172 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 BATF2Q8N1L9 274 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 LY6G5BQ8NDX9 201 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 Q8NFD4 153 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 PXT1Q8NFP0 134 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 OR5D18Q8NGL1 313 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 UFD1Q92890 307 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 CPNE2Q96FN4 548 aaPredicted RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 FAHD2AQ96GK7 314 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 MED30Q96HR3 178 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 MGLLQ99685 303 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 BEX2Q9BXY8 128 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 IL36RNQ9UBH0 155 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 METRNQ9UJH8 293 aa15.43■□□□□ 0.06
PTCD3-204ENST00000418628 RPUSD1Q9UJJ7 312 aaKnown RBP15.43■□□□□ 0.06
PTCD3-204ENST00000418628 NDUFB3O43676 98 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 ZNF737O75373 536 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 SFTPBP07988 381 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 BDKRB2P30411 391 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 CEBPDP49716 269 aaPredicted RBP15.42■□□□□ 0.06
PTCD3-204ENST00000418628 PPP3R1P63098 170 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 TUSC1Q2TAM9 212 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 KCTD21Q4G0X4 260 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 LRRC10Q5BKY1 277 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 DDI2Q5TDH0 399 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 UBE2UQ5VVX9 321 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 ELP2Q6IA86 826 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 BTN2A1Q7KYR7 527 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 PHC2Q8IXK0 858 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 SPARTQ8N0X7 666 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 FAM58AQ8N1B3 248 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 ZNF561Q8N587 486 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 ZNRF1Q8ND25 227 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 ST8SIA4Q92187 359 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 DCTN5Q9BTE1 182 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 C7orf69Q9H7B7 122 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 HMG20AQ9NP66 347 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 NOX4Q9NPH5 578 aa15.42■□□□□ 0.06
PTCD3-204ENST00000418628 SLC25A10Q9UBX3 287 aaPredicted RBP15.42■□□□□ 0.06
PTCD3-204ENST00000418628 CYB5AP00167 134 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 OCMP0CE72 109 aaPredicted RBP15.41■□□□□ 0.06
PTCD3-204ENST00000418628 MMP9P14780 707 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 SRD5A1P18405 259 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 PRDX2P32119 198 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 TGFBR2P37173 567 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 IKZF1Q13422 519 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 SSX1Q16384 188 aa15.41■□□□□ 0.06
PTCD3-204ENST00000418628 ACSM3Q53FZ2 586 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms