RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 OR2W3Q7Z3T1 314 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 FAM58AQ8N1B3 248 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 MRI1Q9BV20 369 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 FAM192AQ9GZU8 254 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 POLQO75417 2590 aa12.75□□□□□ -0.37
LSM5-207ENST00000410044 TMEM14DPA8MWL7 114 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 NXPH2O95156 264 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 KNG1P01042 644 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 CALCBP10092 127 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 ARSBP15848 533 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 SLC25A16P16260 332 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 MDH2P40926 338 aaKnown RBP12.74□□□□□ -0.37
LSM5-207ENST00000410044 NR4A2P43354 598 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 RORCP51449 518 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 HOXA4Q00056 320 aaPredicted RBP12.74□□□□□ -0.37
LSM5-207ENST00000410044 DYNC1I2Q13409 638 aaKnown RBP12.74□□□□□ -0.37
LSM5-207ENST00000410044 ZNF146Q15072 292 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 KCNJ8Q15842 424 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 MICBQ29980 383 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 SMIM21Q3B7S5 101 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 C2orf76Q3KRA6 126 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 Q5PR19 223 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 HES5Q5TA89 166 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 MUC20Q8N307 709 aaPredicted RBP12.74□□□□□ -0.37
LSM5-207ENST00000410044 KCNG3Q8TAE7 436 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 NDNFQ8TB73 568 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 DYNC2LI1Q8TCX1 351 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 PTX4Q96A99 478 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 FAM3DQ96BQ1 224 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 PIMREGQ9BSJ6 248 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 BARHL1Q9BZE3 327 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 RBFOX1Q9NWB1 397 aaKnown RBP12.74□□□□□ -0.37
LSM5-207ENST00000410044 NLKQ9UBE8 527 aa12.74□□□□□ -0.37
LSM5-207ENST00000410044 NAV2Q8IVL1 2488 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 SMIM30A4D0T7 59 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 OR2AT4A6NND4 320 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 HTR3BO95264 441 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 CSTBP04080 98 aaKnown RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 VSIG8P0DPA2 414 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 SLC2A2P11168 524 aaPredicted RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 PSG2P11465 335 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 GTF2F2P13984 249 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 AMY2BP19961 511 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 CD80P33681 288 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 CARTPTQ16568 116 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 SLC22A6Q4U2R8 563 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 SPIN3Q5JUX0 258 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 STUMQ69YW2 141 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 SFRP4Q6FHJ7 346 aaPredicted RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 OSR2Q8N2R0 312 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 BOLLQ8N9W6 283 aaKnown RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 OR51D1Q8NGF3 324 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 ANGPTL6Q8NI99 470 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 KCTD12Q96CX2 325 aaKnown RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 SEH1LQ96EE3 360 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 TMEM246Q9BRR3 403 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 BPESC1Q9GZL8 116 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 CST11Q9H112 138 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 ELL3Q9HB65 397 aaPredicted RBP12.73□□□□□ -0.37
LSM5-207ENST00000410044 ABRACLQ9P1F3 81 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 KAAG1Q9UBP8 84 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 DAPK2Q9UIK4 370 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 ZNF222Q9UK12 451 aa12.73□□□□□ -0.37
LSM5-207ENST00000410044 IGKV1D-17A0A075B6S4 117 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 IGHV4-30-2A0A087WSY4 118 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 CCDC160A6NGH7 325 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
LSM5-207ENST00000410044 LMO1P25800 156 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 ART1P52961 327 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 CLDN12P56749 244 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 UNC119Q13432 240 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 IL13RA2Q14627 380 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 P2RY14Q15391 338 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 FOXB2Q5VYV0 432 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 FIP1L1Q6UN15 594 aaKnown RBP12.72□□□□□ -0.37
LSM5-207ENST00000410044 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 DCDC5Q6ZRR9 648 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 C19orf18Q8NEA5 215 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 OR10K1Q8NGX5 313 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
LSM5-207ENST00000410044 TM2D1Q9BX74 207 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 DNAJB11Q9UBS4 358 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 OR5V1Q9UGF6 321 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
LSM5-207ENST00000410044 A0A096LNT2 108 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 TMEM272A0A1B0GTI8 110 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 A0A1W2PP11 408 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A10PA6NDY2 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A18PA6NE21 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A16PA6NEW6 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A20PA6NIJ5 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A8PA6NJQ4 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A7PA6NKC0 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 RFPL4AA6NLU0 287 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A22PA8MWA6 464 aa12.71□□□□□ -0.37
LSM5-207ENST00000410044 FAM90A12PA8MX19 464 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms