RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MTCH1Q9NZJ7 389 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 CACNG2Q9Y698 323 aa13.89□□□□□ -0.19
TSPAN4-208ENST00000409531 IGKV1-12A0A0C4DH73 117 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 RP2O75695 350 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 CYB5R3P00387 301 aaPredicted RBP13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 LHBP01229 141 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 IGKV1D-12P01611 117 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 PDLIM4P50479 330 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 SCAND1P57086 179 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 ERVK11-1P61568 191 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 SMIM21Q3B7S5 101 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 IDNKQ5T6J7 187 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 ELP2Q6IA86 826 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 CLEC9AQ6UXN8 241 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 C1QL2Q7Z5L3 287 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM90A1Q86YD7 464 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 GCSAMQ8N6F7 178 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 KCNG3Q8TAE7 436 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 C10orf105Q8TEF2 133 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 AP3S1Q92572 193 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 SLC25A28Q96A46 364 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM3DQ96BQ1 224 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 KCTD12Q96CX2 325 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 LIN7BQ9HAP6 207 aa13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 CCDC59Q9P031 241 aaKnown RBP13.88□□□□□ -0.19
TSPAN4-208ENST00000409531 LYNX1G3V0Z9 82 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 NDUFS8O00217 210 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 HTR3BO95264 441 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 FSTL3O95633 263 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 LY6G6DO95868 133 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 LYNX1P0DP58 116 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 CALCBP10092 127 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 SLC25A16P16260 332 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 ZNF182P17025 639 aaPredicted RBP13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 BCL3P20749 454 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 P2RY14Q15391 338 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 CARTPTQ16568 116 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 MICBQ29980 383 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 SLC22A6Q4U2R8 563 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 OR2W3Q7Z3T1 314 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM58AQ8N1B3 248 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 BOLLQ8N9W6 283 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 Q8NFD4 153 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 DYNC2LI1Q8TCX1 351 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 RAB1CQ92928 201 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 EMG1Q92979 244 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 MRPS24Q96EL2 167 aaKnown RBP13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 HES4Q9HCC6 221 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 ABRACLQ9P1F3 81 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 DNAJB11Q9UBS4 358 aa13.87□□□□□ -0.19
TSPAN4-208ENST00000409531 PPIAL4EA0A075B759 164 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 TRAV38-1A0A0B4J264 116 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 PPIAL4DF5H284 164 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 SFTPBP07988 381 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 PPIAL4FP0DN26 164 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 SLC2A2P11168 524 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 GTF2F2P13984 249 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 MUC1P15941 1255 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 SERPINA2P20848 420 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 NPBWR2P48146 333 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 CLDN12P56749 244 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 FGF12P61328 243 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 DYNC1I2Q13409 638 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 KCNJ8Q15842 424 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 FAM189A2Q15884 450 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 FOXB2Q5VYV0 432 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 ACP7Q6ZNF0 438 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 MAPK1IP1LQ8NDC0 245 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 OR51D1Q8NGF3 324 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 ACOT12Q8WYK0 555 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 C1orf147Q96MC9 270 aaPredicted RBP13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 ZNF488Q96MN9 340 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 RBFOX1Q9NWB1 397 aaKnown RBP13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 FBLN5Q9UBX5 448 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 PPIAL4AQ9Y536 164 aa13.86□□□□□ -0.19
TSPAN4-208ENST00000409531 OOEPA6NGQ2 149 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 LGALS8O00214 317 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 PPIHO43447 177 aaKnown RBP13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 CRTAPO75718 401 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 HEXAP06865 529 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 VSIG8P0DPA2 414 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 HOXB4P17483 251 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 PRKACAP17612 351 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 GIFP27352 417 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 GPR6P46095 362 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 GMFBP60983 142 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 BTG1P62324 171 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 C2orf76Q3KRA6 126 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 SPIN3Q5JUX0 258 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 TEX36Q5VZQ5 186 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 MZT2AQ6P582 158 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 OSR2Q8N2R0 312 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 MUC20Q8N307 709 aaPredicted RBP13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 OR10K1Q8NGX5 313 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 PTX4Q96A99 478 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 PIMREGQ9BSJ6 248 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 TMEM59Q9BXS4 323 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 BARHL1Q9BZE3 327 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 HMG20AQ9NP66 347 aa13.85□□□□□ -0.19
TSPAN4-208ENST00000409531 DCAF16Q9NXF7 216 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms