RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 ECI1P42126 302 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MFGE8Q08431 387 aaPredicted RBP9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RIPPLY1Q0D2K3 151 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 EDDM3AQ14507 147 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 KLHL22Q53GT1 634 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PRAMEF5Q5TYX0 476 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 RPL13AP3Q6NVV1 102 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR8H2Q8N162 312 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 AQP11Q8NBQ7 271 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 BBS1Q8NFJ9 593 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR2T33Q8NG76 320 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CHST6Q9GZX3 395 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 OR51V1Q9H2C8 321 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 IL1RAPQ9NPH3 570 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MTCH1Q9NZJ7 389 aa9.35□□□□□ -0.91
SPTLC1P3-201ENST00000403408 TNCP24821 2201 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A18PA6NE21 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A16PA6NEW6 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A20PA6NIJ5 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A9PA6NNJ1 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A12PA8MX19 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A5PA8MXJ8 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 CCL24O00175 119 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 NRASP01111 189 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FABP3P05413 133 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A15PP0C7V4 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A13PP0C7W8 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A14PP0C7W9 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 FAM90A24PP0C7X0 464 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ALOX5APP20292 161 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 BLVRAP53004 296 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 BDH1Q02338 343 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MEF2CQ06413 473 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ASRGL1Q7L266 308 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZNF695Q8IW36 515 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ABHD12Q8N2K0 398 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 PBOV1Q9GZY1 135 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 EFCAB1Q9HAE3 211 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZNF286AQ9HBT8 521 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 MRGBPQ9NV56 204 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 LINC00312Q9Y6C7 94 aa9.34□□□□□ -0.91
SPTLC1P3-201ENST00000403408 A0A1B0GTI1 187 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HMGB1P1B2RPK0 211 aaPredicted RBP9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TNFRSF11BO00300 401 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SRSF10O75494 262 aaKnown RBP9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 INMTO95050 263 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TTRP02766 147 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RPLP1P05386 114 aaKnown RBP9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RAB25P57735 213 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF684Q5T5D7 378 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TPTE2P1Q5T6R2 138 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 GDPD3Q7L5L3 318 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OVCH2Q7RTZ1 564 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF573Q86YE8 665 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 Q8NFD4 153 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 STMN2Q93045 179 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OTULINQ96BN8 352 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 AKR1E2Q96JD6 320 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SNX22Q96L94 193 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 NIPSNAP1Q9BPW8 284 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZFP57Q9NU63 452 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 COPS3Q9UNS2 423 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 BAIAP2Q9UQB8 552 aa9.33□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TMEM269A0A1B0GVZ9 245 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 hADV38S2A0JD32 116 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 RIIAD1A6NNX1 92 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ARPC2O15144 300 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MAGEB4O15481 346 aaPredicted RBP9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CCNB2O95067 398 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ATP6V1B1P15313 513 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ZNF3P17036 446 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DUSP1P28562 367 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 BRS3P32247 399 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OR3A1P47881 315 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 IL24Q13007 206 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 IL18R1Q13478 541 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DIAPH2-AS1Q14236 149 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SNAPC1Q16533 368 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SAMD4BQ5PRF9 694 aaKnown RBP9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PLBD1Q6P4A8 553 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 PIGWQ7Z7B1 504 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 C5orf56Q8N8D9 126 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SLAMF9Q96A28 289 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DGCR6LQ9BY27 220 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 CADM1Q9BY67 442 aaKnown RBP9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 TTTY10Q9BZA0 68 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 DCLRE1BQ9H816 532 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ENPP5Q9UJA9 477 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 POLDIP2Q9Y2S7 368 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 MOB4Q9Y3A3 225 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 HSPE1-MOB4S4R3N1 261 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 U3KQV3 271 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 V9GYS6 101 aa9.32□□□□□ -0.92
SPTLC1P3-201ENST00000403408 ARRDC5A6NEK1 342 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 SEC14L6B5MCN3 397 aa9.31□□□□□ -0.92
SPTLC1P3-201ENST00000403408 BUB1B-PAK6H3BSN5 160 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms