RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SLC22A1O15245 554 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 NXPH2O95156 264 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 CYB5AP00167 134 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 GYPAP02724 150 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 MUC1P15941 1255 aaPredicted RBP13.32□□□□□ -0.28
HMGA1-204ENST00000401473 RPS19P39019 145 aaKnown RBP13.32□□□□□ -0.28
HMGA1-204ENST00000401473 MDH2P40926 338 aaKnown RBP13.32□□□□□ -0.28
HMGA1-204ENST00000401473 CLDN12P56749 244 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 MICBQ29980 383 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 GLIPR1L1Q6UWM5 242 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 TPRA1Q86W33 373 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 Q8NFD4 153 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 REG4Q9BYZ8 158 aa13.32□□□□□ -0.28
HMGA1-204ENST00000401473 ELL3Q9HB65 397 aaPredicted RBP13.32□□□□□ -0.28
HMGA1-204ENST00000401473 MRPS28Q9Y2Q9 187 aaKnown RBP13.32□□□□□ -0.28
HMGA1-204ENST00000401473 IGKV1D-17A0A075B6S4 117 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 TRAV38-1A0A0B4J264 116 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 RFPL4AA6NLU0 287 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 OR2AT4A6NND4 320 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 RFPL4AL1F8VTS6 287 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 PSG2P11465 335 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 SLC25A16P16260 332 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 IL2RGP31785 369 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 LMO4P61968 165 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 BLMHQ13867 455 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 FAM58AQ8N1B3 248 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 CLDND2Q8NHS1 167 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 ANGPTL6Q8NI99 470 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 HMG20AQ9NP66 347 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 RASL12Q9NYN1 266 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 NLKQ9UBE8 527 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DNAJB11Q9UBS4 358 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 A0A1B0GW55 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 IFITM5A6NNB3 132 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 SLC17A2O00624 439 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 PDCD5O14737 125 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 FCN3O75636 299 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L2P0CJ85 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L3P0CJ86 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L4P0CJ87 422 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L5P0CJ88 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L6P0CJ89 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L7P0CJ90 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 HTR2CP28335 458 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUSP1P28562 367 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 PSMD7P51665 324 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 SLC22A6Q4U2R8 563 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 HES5Q5TA89 166 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 STUMQ69YW2 141 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 AWAT2Q6E213 333 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4L9Q6RFH8 374 aaPredicted RBP13.31□□□□□ -0.28
HMGA1-204ENST00000401473 TMEM104Q8NE00 496 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 GAL3ST1Q99999 423 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 KCNK15Q9H427 330 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 PLGRKTQ9HBL7 147 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 DUX4Q9UBX2 424 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 CEPT1Q9Y6K0 416 aa13.31□□□□□ -0.28
HMGA1-204ENST00000401473 KIAA2026Q5HYC2 2103 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 ZFHX3Q15911 3703 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 CEACAM18A8MTB9 384 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 SLC2A2P11168 524 aaPredicted RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 USF1P22415 310 aaPredicted RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 CEBPDP49716 269 aaPredicted RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 RSU1Q15404 277 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 ELP2Q6IA86 826 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 OR10K2Q6IF99 312 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 METAP1DQ6UB28 335 aaPredicted RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 Q8IYB0 196 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 TBC1D15Q8TC07 691 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 EMG1Q92979 244 aaKnown RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 C12orf43Q96C57 262 aaKnown RBP13.3□□□□□ -0.28
HMGA1-204ENST00000401473 METTL9Q9H1A3 318 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 IL36GQ9NZH8 169 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF222Q9UK12 451 aa13.3□□□□□ -0.28
HMGA1-204ENST00000401473 A0A0B4J203 849 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 H7C1Q1 480 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 HTR3BO95264 441 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 WNT2P09544 360 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 PRKACAP17612 351 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 SERPINA2P20848 420 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 SNU13P55769 128 aaKnown RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 FGF12P61328 243 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 QRFPP83859 136 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF146Q15072 292 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 PDCD1Q15116 288 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 SMIM21Q3B7S5 101 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 ATPAF1Q5TC12 328 aaPredicted RBP13.29□□□□□ -0.28
HMGA1-204ENST00000401473 CD177Q8N6Q3 437 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 OR51D1Q8NGF3 324 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 OR6M1Q8NGM8 313 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 S100A13Q99584 98 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 CCL13Q99616 98 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 ZNF581Q9P0T4 197 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 CTSZQ9UBR2 303 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 NOTOA8MTQ0 251 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 AIPO00170 330 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 TMPRSS2O15393 492 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 VSIG8P0DPA2 414 aa13.29□□□□□ -0.28
HMGA1-204ENST00000401473 CFPP27918 469 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms