RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 UQCRFS1P47985 274 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TMEM196Q5HYL7 178 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 YRDCQ86U90 279 aaKnown RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 GVQW1Q8N7I0 195 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OR5M9Q8NGP3 310 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OR4C3Q8NH37 302 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 KISS1RQ969F8 398 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FAM210BQ96KR6 192 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ADAT1Q9BUB4 502 aaKnown RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FAM117AQ9C073 453 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TMEM191AQ9H0A3 160 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 MMP17Q9ULZ9 603 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 AMMECR1Q9Y4X0 333 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TMEM272A0A1B0GTI8 110 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 M0R1B8 84 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ERVH48-1M5A8F1 160 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 CDK2AP1O14519 115 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FUT3P21217 361 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 HTR1DP28221 377 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 PSMB2P49721 201 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 MOB3BQ86TA1 216 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FBXL14Q8N1E6 418 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OR1N1Q8NGS0 311 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 LILRB1Q8NHL6 650 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 NT5CQ8TCD5 201 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ACY3Q96HD9 319 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ARHGAP5-AS1Q96IT6 56 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ADGRG7Q96K78 797 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 NPAS1Q99742 590 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FBXL17Q9UF56 701 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OPN4Q9UHM6 478 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 A0A087WUJ7 227 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 A0A087X0M5 115 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 A0A1B0GTQ1 180 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 A0A1B0GX30 115 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 MS4A18H0YCH9 400 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SPRY1O43609 319 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 GATCO43716 136 aaKnown RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 NTN1O95631 604 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 INHBBP09529 407 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PMCHP20382 165 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 KIR2DL1P43626 348 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 KIR2DL2P43627 348 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ETFDHQ16134 617 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 MS4A18Q3C1V0 323 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 STUMQ69YW2 141 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 MRM1Q6IN84 353 aaKnown RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ZNF547Q8IVP9 402 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PHYHIPLQ96FC7 376 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 NAT8BQ9UHF3 227 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 EXOGQ9Y2C4 368 aaKnown RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SPTA1P02549 2419 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CBR3O75828 277 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 IGHA1P01876 353 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 GP1BAP07359 652 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CDAP32320 146 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 OR1D5P58170 312 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PRDX4Q13162 271 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ATP6V1FQ16864 119 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 AWAT1Q58HT5 328 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 POM121Q96HA1 1249 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 MRGPRX1Q96LB2 322 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 C6orf106Q9H6K1 298 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SLC17A5Q9NRA2 495 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 AMDHD2Q9Y303 409 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 C5orf52A6NGY3 159 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 FFAR1O14842 300 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CCR5P51681 352 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 RPL30P62888 115 aaKnown RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 LSM11P83369 360 aaKnown RBP eCLIP7.91□□□□□ -1.142e-6■■■□□ 19
PTPRM-202ENST00000400053 Q56UQ5 140 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PWWP2BQ6NUJ5 590 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ADTRPQ96IZ2 230 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 TMPRSS13Q9BYE2 586 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SLC2A9Q9NRM0 540 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PRR13Q9NZ81 148 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CLEC1BQ9P126 229 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 A0A0B4J2E0 115 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 TRGV8A0A0C4DH27 118 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 A0A1B0GX12 115 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SLC22A20A6NK97 555 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 CXCL13O43927 109 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 RHOBP62745 196 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 PMS2P11Q13670 270 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ZNF260Q3ZCT1 412 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 DOLPP1Q86YN1 238 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 TUSC5Q8IXB3 177 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 C20orf196Q8IYI0 205 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 UBALD1Q8TB05 177 aa7.91□□□□□ -1.14
PTPRM-202ENST00000400053 SIRT3Q9NTG7 399 aaPredicted RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 ZNFX1Q9P2E3 1918 aaKnown RBP7.91□□□□□ -1.14
PTPRM-202ENST00000400053 RBBP6Q7Z6E9 1792 aaKnown RBP7.9□□□□□ -1.14
PTPRM-202ENST00000400053 SIGLEC5O15389 551 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 SPINK4O60575 86 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 FPR2P25090 351 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 HAAOP46952 286 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 GNG3P63215 75 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 IFITM2Q01629 132 aa7.9□□□□□ -1.14
PTPRM-202ENST00000400053 SIGLEC14Q08ET2 396 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms