RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 DACT3Q96B18 629 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 CPNE2Q96FN4 548 aaPredicted RBP17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 MED30Q96HR3 178 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 DERL3Q96Q80 235 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 NUDT16L1Q9BRJ7 211 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 TMED9Q9BVK6 235 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 RBFOX1Q9NWB1 397 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 CKLFQ9UBR5 152 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 OR14J1Q9UGF5 321 aa17.58■□□□□ 0.41
TSPAN4-206ENST00000397408 IGKV1-12A0A0C4DH73 117 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 A0A1W2PPK0 400 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 ENSAO43768 121 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 KNG1P01042 644 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 IGKV1D-12P01611 117 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 SRD5A1P18405 259 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 FSTP19883 344 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 BCL3P20749 454 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 SRP14P37108 136 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 NPBWR2P48146 333 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 CD276Q5ZPR3 534 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 C1orf229Q6ZS94 237 aaPredicted RBP17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 SATL1Q86VE3 508 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 CD177Q8N6Q3 437 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 OR52N4Q8NGI2 321 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 SDSLQ96GA7 329 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 MRI1Q9BV20 369 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 YTHDF1Q9BYJ9 559 aaKnown RBP17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 ISYNA1Q9NPH2 558 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 TMEM138Q9NPI0 162 aa17.57■□□□□ 0.4
TSPAN4-206ENST00000397408 TRAV8-7A0A075B6U6 113 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 FAM157CP0CG43 387 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 TMEM225BP0DP42 221 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 IGFBP3P17936 291 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 MAPK3P27361 379 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 PRDX2P32119 198 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 ZP1P60852 638 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 MLLT11Q13015 90 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 DDI2Q5TDH0 399 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 BTN2A1Q7KYR7 527 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 ZNF367Q7RTV3 350 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 MS4A15Q8N5U1 240 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 ZNRF1Q8ND25 227 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 TMEM185AQ8NFB2 350 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 THRSPQ92748 146 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 POM121Q96HA1 1249 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 GPER1Q99527 375 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 NKX3-1Q99801 234 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 ACOT13Q9NPJ3 140 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 SLC25A10Q9UBX3 287 aaPredicted RBP17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 OPN4Q9UHM6 478 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 MAB21L2Q9Y586 359 aa17.56■□□□□ 0.4
TSPAN4-206ENST00000397408 KIR2DS1A0A191URI9 304 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 GABRPO00591 440 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 MRPS14O60783 128 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 ALDOBP05062 364 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 CALCBP10092 127 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 ADRA2CP18825 462 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 BDKRB2P30411 391 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 GPR50Q13585 617 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 TPBGQ13641 420 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 INSL4Q14641 139 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 MGLLQ99685 303 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 NOX4Q9NPH5 578 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 IL36RNQ9UBH0 155 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 METRNQ9UJH8 293 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 AUP1Q9Y679 476 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 MAGEA13PA6NCF6 341 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 PIN1P1O15428 100 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 GPX5O75715 221 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 KDM4BO94953 1096 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 ECDO95905 644 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 NDUFB7P17568 137 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 TGFBR2P37173 567 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 SNU13P55769 128 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 PAX8Q06710 450 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 ACSM3Q53FZ2 586 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 FIP1L1Q6UN15 594 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 SAXO1Q8IYX7 474 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 FAM58AQ8N1B3 248 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 SVOPQ8N4V2 548 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 ZSCAN4Q8NAM6 433 aaPredicted RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 TNFAIP8L1Q8WVP5 186 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 H1FXQ92522 213 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 FAM192AQ9GZU8 254 aa17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 RPUSD1Q9UJJ7 312 aaKnown RBP17.55■□□□□ 0.4
TSPAN4-206ENST00000397408 CPEP16870 476 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 PRKACAP17612 351 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 CAPZA1P52907 286 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 EMX1Q04741 257 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 C11orf91Q3C1V1 193 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 C1QL2Q7Z5L3 287 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 ZNF561Q8N587 486 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 TEX29Q8N6K0 151 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 TMEM203Q969S6 136 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 ELL3Q9HB65 397 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 FOXJ3Q9UPW0 622 aa17.54■□□□□ 0.4
TSPAN4-206ENST00000397408 GPR37O15354 613 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 SFTPBP07988 381 aa17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 ZNF93P35789 620 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-206ENST00000397408 OR3A4PP47883 348 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms