RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 BLVRBP30043 206 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 GLCCI1Q86VQ1 547 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 PIAS4Q8N2W9 510 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF808Q8N4W9 903 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 SPERTQ8NA61 448 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 LILRB1Q8NHL6 650 aaPredicted RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 ZNF488Q96MN9 340 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 SYT3Q9BQG1 590 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 NRIP2Q9BQI9 281 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 OCSTAMPQ9BR26 566 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 IFT22Q9H7X7 185 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 RCC2Q9P258 522 aaKnown RBP10.78□□□□□ -0.68
TRIM39-204ENST00000396548 IL36RNQ9UBH0 155 aa10.78□□□□□ -0.68
TRIM39-204ENST00000396548 PRSS44E7EML9 344 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 C1QL1O75973 258 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 PMELP40967 661 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 TAF9Q16594 264 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 SPRNQ5BIV9 151 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 CHST4Q8NCG5 386 aa10.77□□□□□ -0.68
TRIM39-204ENST00000396548 MEIS3P1A6NDR6 274 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 CD74P04233 296 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 C6orf201Q7Z4U5 140 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 TMEM229BQ8NBD8 167 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 NUDCD2Q8WVJ2 157 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 RADILQ96JH8 1075 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 TMEM204Q9BSN7 226 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 ESRP2Q9H6T0 727 aaKnown RBP10.77□□□□□ -0.69
TRIM39-204ENST00000396548 NGBQ9NPG2 151 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 TRAPPC2LH3BP13 241 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 CSF1P09603 554 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 GABRR1P24046 479 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 MZT2BQ6NZ67 158 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 CELF2-AS1Q8N7Q2 184 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 PLPPR2Q96GM1 343 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 NDRG3Q9UGV2 375 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 DUSP13Q9UII6 198 aa10.77□□□□□ -0.69
TRIM39-204ENST00000396548 CHD3Q12873 2000 aaKnown RBP10.77□□□□□ -0.69
TRIM39-204ENST00000396548 SERPINE3A8MV23 424 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 DEFB108AA8MXU0 73 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 CDIPTO14735 213 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 MT-ND4P03905 459 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 MPPED2Q15777 294 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 PCGF3Q3KNV8 242 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 SLC22A25Q6T423 547 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 TRAPPC6BQ86SZ2 158 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 LINC00596Q86U02 117 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 BATF2Q8N1L9 274 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 POC1AQ8NBT0 407 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 OR4D10Q8NGI6 311 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 TAS2R8Q9NYW2 309 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 POU2F3Q9UKI9 436 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 HRNRQ86YZ3 2850 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-204ENST00000396548 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-204ENST00000396548 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-204ENST00000396548 B8ZZF3 427 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 E7EQL1 145 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 CLDN14O95500 239 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 ADH4P08319 380 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 INPP1P49441 399 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 AP3S2P59780 193 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 ADAM5Q6NVV9 412 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 WDR82Q6UXN9 313 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 Q6ZPA2 131 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 GVQW1Q8N7I0 195 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 SNAPC3Q92966 411 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 EMG1Q92979 244 aaKnown RBP10.76□□□□□ -0.69
TRIM39-204ENST00000396548 FBXW5Q969U6 566 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 SULT4A1Q9BR01 284 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 MMP28Q9H239 520 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 TAAR3PQ9P1P4 343 aa10.76□□□□□ -0.69
TRIM39-204ENST00000396548 KMT2BQ9UMN6 2715 aaPredicted RBP10.76□□□□□ -0.69
TRIM39-204ENST00000396548 ZG16O60844 167 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 PRB1P04280 392 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 ZNF735P0CB33 412 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 RCVRNP35243 200 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 ACTBP60709 375 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 ACTG1P63261 375 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 Q6P435 159 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 ZNF843Q8N446 348 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 UPRTQ96BW1 309 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 MARVELD1Q9BSK0 173 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 TMEM165Q9HC07 324 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 POLDIP2Q9Y2S7 368 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 CADP27708 2225 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 A0A0B4J293 547 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 NAP1L6A6NFF2 107 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 CD3DP04234 171 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 GRPP07492 148 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 CFHR2P36980 270 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 GATA4P43694 442 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 IL13RA2Q14627 380 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 MPV17LQ2QL34 196 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 MST1LQ2TV78 715 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 PRAMEF6Q5VXH4 476 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 FAM58AQ8N1B3 248 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 OR2Z1Q8NG97 314 aa10.75□□□□□ -0.69
TRIM39-204ENST00000396548 NEUROG1Q92886 237 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms