RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 GNRHR2Q96P88 292 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 PLEKHA2Q9HB19 425 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 SLC2A9Q9NRM0 540 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 B9D1Q9UPM9 204 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 RHBDD3Q9Y3P4 386 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 AKAP6Q13023 2319 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 DENND4CQ5VZ89 1909 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 MARCH11A6NNE9 402 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 TSPAN2O60636 221 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 DUS4LO95620 317 aaKnown RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 WNT11O96014 354 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 NGFRP08138 427 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 COX5BP10606 129 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LPAR6P43657 344 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 LIMS1P48059 325 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 DLK1P80370 383 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 TGFBR3Q03167 851 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 PMPCAQ10713 525 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 TMEM128Q5BJH2 165 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 STPG1Q5TH74 334 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 DRAM2Q6UX65 266 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 OR5D14Q8NGL3 314 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 ADIPOR1Q96A54 375 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 TP53RKQ96S44 253 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 GPA33Q99795 319 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 FAM173AQ9BQD7 235 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 WFDC6Q9BQY6 131 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 ADAM19Q9H013 955 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 SLC25A31Q9H0C2 315 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 OR10A2Q9H208 303 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 RYDENQ9NUL5 291 aaKnown RBP5.04□□□□□ -1.6
RFFL-202ENST00000394597 MED29Q9NX70 200 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 PAM16Q9Y3D7 125 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 CACNA1EQ15878 2313 aa5.04□□□□□ -1.6
RFFL-202ENST00000394597 VSTM5A8MXK1 200 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 SHISA8B8ZZ34 492 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 MASP2O00187 686 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CTAG2O75638 210 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ZFPL1O95159 310 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 NTN1O95631 604 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 GCGP01275 180 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 HPNP05981 417 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TMIGD3P0DMS9 266 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 CD79AP11912 226 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ALOX5APP20292 161 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CCKARP32238 428 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 SLC25A1P53007 311 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 MYBPHQ13203 477 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ARSJQ5FYB0 599 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 SLC16A14Q7RTX9 510 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DCXRQ7Z4W1 244 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 LRRC18Q8N456 261 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 C17orf78Q8N4C9 275 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TMEM217Q8N7C4 229 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 POC1BQ8TC44 478 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 NKX3-1Q99801 234 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 PRSS27Q9BQR3 290 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CHST5Q9GZS9 411 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ZNF552Q9H707 407 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 DNAJC4Q9NNZ3 241 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 RAB22AQ9UL26 194 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 HSF4Q9ULV5 492 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TIMM8BQ9Y5J9 83 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 SPAARA0A1B0GVQ0 90 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ZNF320A2RRD8 509 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DLEU1O43261 78 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 XRCC2O43543 280 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DOK2O60496 412 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TOX4O94842 621 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TIAF1O95411 115 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 AGAP20933 346 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 RPS4Y1P22090 263 aaKnown RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 IL2RGP31785 369 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ID4P47928 161 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 MLF1P58340 268 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 IKZF1Q13422 519 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TESK1Q15569 626 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 OR1C1Q15619 314 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DEFB109BQ30KR1 87 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ZNF813Q6ZN06 617 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 FAM219AQ8IW50 185 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ARRDC1Q8N5I2 433 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 GJC3Q8NFK1 279 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 RBMXL1Q96E39 390 aaKnown RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 SPIN2AQ99865 258 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 SPIN2BQ9BPZ2 258 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 CALHM2Q9HA72 323 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 ASCL3Q9NQ33 180 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 LYRM2Q9NU23 88 aaPredicted RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 PLA2G3Q9NZ20 509 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 KCNE5Q9UJ90 142 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 TMED3Q9Y3Q3 217 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 E5RGE8 158 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 MSTNO14793 375 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 RRP8O43159 456 aaKnown RBP5.03□□□□□ -1.6
RFFL-202ENST00000394597 CXCL13O43927 109 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 DIRAS3O95661 229 aa5.03□□□□□ -1.6
RFFL-202ENST00000394597 MBPP02686 304 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms