RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 PINLYPA6NC86 204 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 PCP4L1A6NKN8 68 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 SYNGR3O43761 229 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 MTRF1O75570 445 aaKnown RBP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 MED6O75586 246 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 TRAPPC6AO75865 159 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FKBP2P26885 142 aaKnown RBP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ALDH3B1P43353 468 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FOXL2NBQ6ZUU3 175 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 NTNG2Q96CW9 530 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 THOC3Q96J01 351 aaKnown RBP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FBXL17Q9UF56 701 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 C14orf166Q9Y224 244 aaKnown RBP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FREM1Q5H8C1 2179 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF850A8MQ14 1090 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 RBMXP38159 391 aaKnown RBP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 CBX5P45973 191 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 RSU1Q15404 277 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 SPINK14Q6IE38 97 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 LYZL2Q7Z4W2 148 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FBXL14Q8N1E6 418 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ADAMTS17Q8TE56 1095 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 PP6455Q8WZ26 134 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 PSMF1Q92530 271 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 AIFM2Q9BRQ8 373 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ZPBPQ9BS86 351 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 DDA1Q9BW61 102 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 SPRY4Q9C004 299 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 RHOFQ9HBH0 211 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 TAF9BQ9HBM6 251 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 ANXA10Q9UJ72 324 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 LOC400499M0QZD8 3231 aa11.69□□□□□ -0.54
GTF2F1-201ENST00000394456 FHITP49789 147 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 PIGPP57054 158 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 RAC1P63000 192 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 PSG4Q00888 419 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF92Q03936 586 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 OR5L1Q8NGL2 311 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 ABHD3Q8WU67 409 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 LOXL4Q96JB6 756 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 CNTNAP3BQ96NU0 1288 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 CNTNAP3Q9BZ76 1288 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 CNOT1A5YKK6 2376 aaKnown RBP11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 MT-CO3P00414 261 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 SERPINA7P05543 415 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 CCL2P13500 99 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 FCGR2CP31995 323 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 HTR5AP47898 357 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 NAAAQ02083 359 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 DAZAP2Q15038 168 aaPredicted RBP11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 HFEQ30201 348 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 FAM27BQ5VT28 67 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 HAGHLQ6PII5 290 aaPredicted RBP11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 GGNQ86UU5 652 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 OR10AD1Q8NGE0 317 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 SPTSSAQ969W0 71 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 AMDHD2Q9Y303 409 aa11.68□□□□□ -0.54
GTF2F1-201ENST00000394456 OTOGLQ3ZCN5 2332 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 C1QL1O75973 258 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 FCGR3AP08637 254 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 OR8U9P0C7N5 309 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 NPBWR2P48146 333 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CYB561P49447 251 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 TMEM33P57088 247 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 IGFBP7Q16270 282 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CEACAM16Q2WEN9 425 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CALHM1Q8IU99 346 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CCDC36Q8IYA8 594 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 ZFP82Q8N141 532 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 OR1F12Q8NHA8 337 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CMSS1Q9BQ75 279 aaKnown RBP11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 WFDC1Q9HC57 220 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 MMP26Q9NRE1 261 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 A0A1B0GV50 99 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 SRD5A2P31213 254 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF84P51523 738 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF133P52736 654 aaPredicted RBP11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 FOXG1P55316 489 aaPredicted RBP11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 MRPS34P82930 218 aaKnown RBP11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 STK11Q15831 433 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 UQCC3Q6UW78 93 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 FNDC9Q8TBE3 224 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 ZDHHC8Q9ULC8 765 aa11.67□□□□□ -0.54
GTF2F1-201ENST00000394456 ZNF716A6NP11 495 aa11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 SLC33A1O00400 549 aaPredicted RBP11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 MBPP02686 304 aaPredicted RBP11.66□□□□□ -0.54
GTF2F1-201ENST00000394456 GDF1P27539 372 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms