RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 DEDD2Q8WXF8 326 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 GTF3AQ92664 365 aaKnown RBP17.24■□□□□ 0.35
HDDC3-202ENST00000394272 TLNRD1Q9H1K6 362 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 HRASLSQ9HDD0 168 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 HSF4Q9ULV5 492 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 FAM240BA0A1B0GVZ2 78 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ZSCAN5BA6NJL1 495 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 CENPXA8MT69 81 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 CSF1P09603 554 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ADAM5Q6NVV9 412 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 C6orf201Q7Z4U5 140 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 C11orf53Q8IXP5 236 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 DMRTC2Q8IXT2 367 aaPredicted RBP17.24■□□□□ 0.35
HDDC3-202ENST00000394272 PLPPR2Q96GM1 343 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ZNF488Q96MN9 340 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 RHOFQ9HBH0 211 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 FAIMQ9NVQ4 179 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 POLDIP2Q9Y2S7 368 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A10PA6NDY2 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A18PA6NE21 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A16PA6NEW6 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A20PA6NIJ5 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A8PA6NJQ4 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A7PA6NKC0 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 SERPINE3A8MV23 424 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A22PA8MWA6 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A12PA8MX19 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A5PA8MXJ8 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A23PA8MXZ1 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 CDIPTO14735 213 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 GRPP07492 148 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A15PP0C7V4 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A13PP0C7W8 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A14PP0C7W9 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 FAM90A24PP0C7X0 464 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 AGAP20933 346 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 CHATP28329 748 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 GNG2P59768 71 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 SELENOVP59797 346 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 TRAPPC6BQ86SZ2 158 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 TAAR3PQ9P1P4 343 aa17.23■□□□□ 0.35
HDDC3-202ENST00000394272 ZNF107Q9UII5 783 aaPredicted RBP17.23■□□□□ 0.35
HDDC3-202ENST00000394272 SHISA9B4DS77 424 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ZG16O60844 167 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 CA11O75493 328 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PTBP3O95758 552 aaKnown RBP17.22■□□□□ 0.35
HDDC3-202ENST00000394272 CD200P41217 278 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ERVK11-1P61568 191 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ADIPOQQ15848 244 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PLA1AQ53H76 456 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 GLCCI1Q86VQ1 547 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ZNF808Q8N4W9 903 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ITLN2Q8WWU7 325 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-202ENST00000394272 MMP28Q9H239 520 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PLEKHJ1Q9NW61 149 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 NLKQ9UBE8 527 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 IL36RNQ9UBH0 155 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ATP23Q9Y6H3 246 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 IGHV3-64DA0A0J9YX35 117 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PLSCR5A0PG75 271 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PRSS44E7EML9 344 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 MT-ND4P03905 459 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ACAA1P09110 424 aaPredicted RBP17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PGA5P0DJD9 388 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 MZT1Q08AG7 82 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 NKAPLQ5M9Q1 402 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 CELF2-AS1Q8N7Q2 184 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 OR2Z1Q8NG97 314 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 PLK3Q9H4B4 646 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 ANAPC10Q9UM13 185 aa17.22■□□□□ 0.35
HDDC3-202ENST00000394272 NAP1L6A6NFF2 107 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 TUBAL3A6NHL2 446 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 CLDN14O95500 239 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 FCER2P06734 321 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 RCVRNP35243 200 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 PRAMEF6Q5VXH4 476 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 Q8IYB0 196 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 FAM58AQ8N1B3 248 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 GVQW1Q8N7I0 195 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 TMEM229BQ8NBD8 167 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 NRIP2Q9BQI9 281 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 NPDC1Q9NQX5 325 aaPredicted RBP17.21■□□□□ 0.35
HDDC3-202ENST00000394272 POU2F3Q9UKI9 436 aa17.21■□□□□ 0.35
HDDC3-202ENST00000394272 B8ZZF3 427 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 SIAH2O43255 324 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 NOS1APO75052 506 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-202ENST00000394272 PDCD6O75340 191 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 OR7C1O76099 320 aaPredicted RBP17.2■□□□□ 0.34
HDDC3-202ENST00000394272 OR4A8P0C604 315 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 PRKACAP17612 351 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 TAS2R19P59542 299 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 MPPED2Q15777 294 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 MPV17LQ2QL34 196 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 ELMOD3Q96FG2 381 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 CD3DP04234 171 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 CD3EP07766 207 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 GIFP27352 417 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 ARFRP1Q13795 201 aa17.2■□□□□ 0.34
HDDC3-202ENST00000394272 PDCD1Q15116 288 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms