RNA–Protein interactions for RNA: ENST00000394202.8

CNN3-202, Transcript of calponin 3, humanhuman

TSL 2 BASIC

Gene CNN3, Length 1,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-202ENST00000394202 PGA5P0DJD9 388 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 TMEM50BP56557 158 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 ERVK11-1P61568 191 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 GPR176Q14439 515 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 TAF9Q16594 264 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 ELP2Q6IA86 826 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 NRIP2Q9BQI9 281 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 WDR13Q9H1Z4 485 aa19.66■□□□□ 0.74
CNN3-202ENST00000394202 METTL21EPA6NDL7 271 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 GEMIN2O14893 280 aaKnown RBP19.65■□□□□ 0.74
CNN3-202ENST00000394202 DANCRP0C864 163 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 SRP9P49458 86 aaKnown RBP19.65■□□□□ 0.74
CNN3-202ENST00000394202 TAS2R20P59543 309 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 MZT1Q08AG7 82 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 PYDC2Q56P42 97 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 CELF2-AS1Q8N7Q2 184 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 TM2D1Q9BX74 207 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 GCM1Q9NP62 436 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 DIABLOQ9NR28 239 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 ST3GAL6Q9Y274 331 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 POLDIP2Q9Y2S7 368 aa19.65■□□□□ 0.74
CNN3-202ENST00000394202 GABRR1P24046 479 aa19.64■□□□□ 0.74
CNN3-202ENST00000394202 DUSP1P28562 367 aa19.64■□□□□ 0.74
CNN3-202ENST00000394202 PLAC9Q5JTB6 97 aa19.64■□□□□ 0.74
CNN3-202ENST00000394202 SP5Q6BEB4 398 aaPredicted RBP19.64■□□□□ 0.74
CNN3-202ENST00000394202 SIGIRRQ6IA17 410 aa19.64■□□□□ 0.74
CNN3-202ENST00000394202 CENPEQ02224 2701 aa19.64■□□□□ 0.74
CNN3-202ENST00000394202 hCG_1807616A0A1W2PRN6 198 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 FOXI3A8MTJ6 420 aaPredicted RBP19.64■□□□□ 0.73
CNN3-202ENST00000394202 CD55P08174 381 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 PRKACAP17612 351 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 TNFSF4P23510 183 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 GATA4P43694 442 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 FGF12P61328 243 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 IFITM3Q01628 133 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 BAK1Q16611 211 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 OR10R2Q8NGX6 335 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 URM1Q9BTM9 101 aaKnown RBP19.64■□□□□ 0.73
CNN3-202ENST00000394202 MS4A5Q9H3V2 200 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 UBTD1Q9HAC8 227 aa19.64■□□□□ 0.73
CNN3-202ENST00000394202 CD40LGP29965 261 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 RBM11P57052 281 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 C11orf71Q6IPW1 123 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 FAM58AQ8N1B3 248 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 PHF21AQ96BD5 680 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 DIRC2Q96SL1 478 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 DCAF16Q9NXF7 216 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 COL8A1P27658 744 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 SNRPD2P62316 118 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 RNASE12Q5GAN4 147 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 OLFML2AQ68BL7 652 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 POC1AQ8NBT0 407 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 CHST4Q8NCG5 386 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 LRRC29Q8WV35 223 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 EMG1Q92979 244 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 MRPS24Q96EL2 167 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 CBLN4Q9NTU7 201 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 KCNK7Q9Y2U2 307 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 CACNG2Q9Y698 323 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 GCN1Q92616 2671 aaKnown RBP19.63■□□□□ 0.73
CNN3-202ENST00000394202 CELSR2Q9HCU4 2923 aa19.63■□□□□ 0.73
CNN3-202ENST00000394202 MEIOCA2RUB1 952 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 TPD52L2O43399 206 aaKnown RBP19.62■□□□□ 0.73
CNN3-202ENST00000394202 NOS1APO75052 506 aaPredicted RBP19.62■□□□□ 0.73
CNN3-202ENST00000394202 GNB3P16520 340 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 EGR1P18146 543 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 BLVRBP30043 206 aaPredicted RBP19.62■□□□□ 0.73
CNN3-202ENST00000394202 PYHIN1Q6K0P9 492 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 ARHGAP5-AS1Q96IT6 56 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 VRK1Q99986 396 aaPredicted RBP19.62■□□□□ 0.73
CNN3-202ENST00000394202 FN3KRPQ9HA64 309 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 LAMP3Q9UQV4 416 aa19.62■□□□□ 0.73
CNN3-202ENST00000394202 NXPH2O95156 264 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 ACAA1P09110 424 aaPredicted RBP19.61■□□□□ 0.73
CNN3-202ENST00000394202 CPT2P23786 658 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 NR4A2P43354 598 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 DGCR2P98153 550 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 FAM209AQ5JX71 171 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 BRICD5Q6PL45 260 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 Q8N402 240 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 OR56B1Q8NGI3 324 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 HES4Q9HCC6 221 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 PCDHB16Q9NRJ7 776 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.61■□□□□ 0.73
CNN3-202ENST00000394202 LANCL1O43813 399 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 HPXP02790 462 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 CHRM2P08172 466 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 PTBP1P26599 531 aaKnown RBP eCLIP19.61■□□□□ 0.73
CNN3-202ENST00000394202 CDNFQ49AH0 187 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 FAM201AQ5SY85 155 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 AGAP6Q5VW22 663 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 RAB12Q6IQ22 244 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 DTX2Q86UW9 622 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 GCSAMQ8N6F7 178 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 C19orf18Q8NEA5 215 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 AUNIPQ9H7T9 357 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 SAP30LQ9HAJ7 183 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 DECR2Q9NUI1 292 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 PPP1R3CQ9UQK1 317 aa19.61■□□□□ 0.73
CNN3-202ENST00000394202 A0A0A6YYH2 397 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms