RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 OR10S1Q8NGN2 331 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 RNF128Q8TEB7 428 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ANKRD9Q96BM1 317 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 TAC3Q9UHF0 121 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF443Q9Y2A4 671 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 FBLL1A6NHQ2 334 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NDUFS4O43181 175 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 TSPAN6O43657 245 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 HOXB9P17482 250 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 GCH1P30793 250 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CAPZBP47756 277 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 EFNA3P52797 238 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CTXN1P60606 82 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ZNF154Q13106 437 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 OGFOD3Q6PK18 319 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 PARS2Q7L3T8 475 aaKnown RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CITED1Q99966 193 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 CHRDL1Q9BU40 450 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 DERL1Q9BUN8 251 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 MFRPQ9BY79 579 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 NKX2-4Q9H2Z4 354 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 MOB1AQ9H8S9 216 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.78□□□□□ -1.32
VTI1A-201ENST00000393077 ABI3Q9P2A4 366 aa6.78□□□□□ -1.32
VTI1A-201ENST00000393077 KCNE1BA0A087WTH5 132 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 KIAA1324LA8MWY0 1029 aaPredicted RBP6.77□□□□□ -1.33
VTI1A-201ENST00000393077 PRAMEF26H0Y7S4 382 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 PIN1P1O15428 100 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CST7O76096 145 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 NKX2-1P43699 371 aaPredicted RBP6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TAS2R30P59541 319 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 RAE1P78406 368 aaKnown RBP6.77□□□□□ -1.33
VTI1A-201ENST00000393077 ZP2Q05996 745 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 PRAMEF5Q5TYX0 476 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 PRAMEF6Q5VXH4 476 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SLC18B1Q6NT16 456 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 RFLNAQ6ZTI6 216 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 AMZ2Q86W34 360 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 D2HGDHQ8N465 521 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CCDC71LQ8N9Z2 235 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TMEM170AQ8WVE7 144 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 MRGPRX1Q96LB2 322 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 OR10A5Q9H207 317 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 BCL2L10Q9HD36 194 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 MANBALQ9NQG1 85 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 G6PC2Q9NQR9 355 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TAS2R4Q9NYW5 299 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 GBF1Q92538 1859 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 HEATR5AQ86XA9 2040 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 EDDM13A0A1B0GTR0 161 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 GAGE12BA1L429 117 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 HSBP1O75506 76 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CD33P20138 364 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 ATP6V0CP27449 155 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 BTG2P78543 158 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TGFBR3Q03167 851 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 Q7L0L9 218 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CADM4Q8NFZ8 388 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 DIO2Q92813 273 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 FGF13Q92913 245 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 ANAPC16Q96DE5 110 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 GNRHR2Q96P88 292 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TIMM29Q9BSF4 260 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SH3BGRL3Q9H299 93 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CDC42EP3Q9UKI2 254 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TRAV8-7A0A075B6U6 113 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CNIH1O95406 144 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 CDS2O95674 445 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SLC6A8P48029 635 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SPINT3P49223 89 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 FUT5Q11128 374 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 AGERQ15109 404 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 ACKR1Q16570 336 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 TCTN1Q2MV58 587 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 AMMECR1LQ6DCA0 310 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 C12orf54Q6X4T0 127 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SLCO4C1Q6ZQN7 724 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 STPG4Q8N801 248 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 OR10P1Q8NGE3 313 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 OR51T1Q8NGJ9 327 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 LRRC3BQ96PB8 259 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 SF3B5Q9BWJ5 86 aaKnown RBP6.77□□□□□ -1.33
VTI1A-201ENST00000393077 GTSF1LQ9H1H1 148 aa6.77□□□□□ -1.33
VTI1A-201ENST00000393077 GRIFINA4D1Z8 144 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 LINC01553A4QN01 128 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 FCN1O00602 326 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 SERPINE2P07093 398 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 RAB38P57729 211 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 CLDN2P57739 230 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 TGIF2LYQ8IUE0 185 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 OR2AJ1Q8NGZ0 328 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 DPF1Q92782 380 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 DCBLD2Q96PD2 775 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 KLHDC3Q9BQ90 382 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 MS4A8Q9BY19 250 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 PEF1Q9UBV8 284 aaKnown RBP6.76□□□□□ -1.33
VTI1A-201ENST00000393077 RGPD3A6NKT7 1758 aaPredicted RBP6.76□□□□□ -1.33
VTI1A-201ENST00000393077 RGPD4Q7Z3J3 1758 aa6.76□□□□□ -1.33
VTI1A-201ENST00000393077 CLEC18AA5D8T8 446 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms