RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 RUNX1Q01196 453 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 P2RY6Q15077 328 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 TEX38Q6PEX7 206 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 SLC35G3Q8N808 338 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 OR8G5Q8NG78 346 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 OR14L1PQ8NHC6 308 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 RTN4IP1Q8WWV3 396 aaPredicted RBP13.1□□□□□ -0.31
CTNS-202ENST00000381870 R3HDM4Q96D70 268 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 TMEM208Q9BTX3 173 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 GPR84Q9NQS5 396 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 HRASLS2Q9NWW9 162 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 IL17BQ9UHF5 180 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 GOLT1BQ9Y3E0 138 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 ARHGEF17Q96PE2 2063 aaPredicted RBP13.1□□□□□ -0.31
CTNS-202ENST00000381870 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 TGOLN2O43493 480 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 NPIPB7O75200 414 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 ONECUT2O95948 504 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 GCGP01275 180 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 CD55P08174 381 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 MMP9P14780 707 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 SFTPDP35247 375 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 SLC6A8P48029 635 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 ZFP36L1Q07352 338 aaKnown RBP13.1□□□□□ -0.31
CTNS-202ENST00000381870 RAB35Q15286 201 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 TAF9Q16594 264 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 FAM90A2PQ658T7 463 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 THNSL2Q86YJ6 484 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
CTNS-202ENST00000381870 NXT1Q9UKK6 140 aaKnown RBP13.1□□□□□ -0.31
CTNS-202ENST00000381870 TRBV24-1A0A075B6N3 115 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 A0A0J9YY10 115 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 IFNL4K9M1U5 179 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 CYB5R3P00387 301 aaPredicted RBP13.09□□□□□ -0.31
CTNS-202ENST00000381870 TMEM225BP0DP42 221 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 GP1BBP13224 206 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 ECI1P42126 302 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 FXYD4P59646 89 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 PAX5Q02548 391 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 WDR25Q64LD2 544 aaPredicted RBP13.09□□□□□ -0.31
CTNS-202ENST00000381870 OR2C3Q8N628 320 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 OR10A7Q8NGE5 316 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 OR2AJ1Q8NGZ0 328 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 ASB10Q8WXI3 467 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 ATG2BQ96BY7 2078 aa13.09□□□□□ -0.31
CTNS-202ENST00000381870 C17orf105B2RV13 164 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 FOLR1P15328 257 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 ZNF43P17038 809 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 EPHA1P21709 976 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 RRADP55042 308 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 ZNF266Q14584 549 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 GNMTQ14749 295 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 ABCA11PQ4W5N1 156 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 CNKSR3Q6P9H4 555 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 LIAT1Q6ZQX7 453 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 SUMF1Q8NBK3 374 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 OR8B12Q8NGG6 310 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 DNASE2BQ8WZ79 361 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 GAB2Q9UQC2 676 aa13.08□□□□□ -0.31
CTNS-202ENST00000381870 A6NCN8 305 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 NPIPA5E9PKD4 350 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 MS4A18H0YCH9 400 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 DLEU1O43261 78 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 KLF8O95600 359 aaPredicted RBP13.08□□□□□ -0.32
CTNS-202ENST00000381870 TK1P04183 234 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 MS4A18Q3C1V0 323 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 KCNK17Q96T54 332 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 DECR2Q9NUI1 292 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 TMEM242Q9NWH2 141 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 NPIPA1Q9UND3 350 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 CEP290O15078 2479 aa13.08□□□□□ -0.32
CTNS-202ENST00000381870 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 SERPINE3A8MV23 424 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 RRP8O43159 456 aaKnown RBP13.07□□□□□ -0.32
CTNS-202ENST00000381870 ZNF728P0DKX0 622 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ALDH3B1P43353 468 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ANKRD39Q53RE8 183 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 CRIP3Q6Q6R5 217 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 SLC16A14Q7RTX9 510 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 OR4D5Q8NGN0 318 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 OR11L1Q8NGX0 322 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 MSI2Q96DH6 328 aaKnown RBP13.07□□□□□ -0.32
CTNS-202ENST00000381870 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 EMC6Q9BV81 110 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 PITX3O75364 302 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ACRP10323 421 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 GABRR1P24046 479 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 HSF1Q00613 529 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 KISS1Q15726 138 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ZNF248Q8NDW4 579 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ELL3Q9HB65 397 aaPredicted RBP13.07□□□□□ -0.32
CTNS-202ENST00000381870 GLRX2Q9NS18 164 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 ANXA10Q9UJ72 324 aa13.07□□□□□ -0.32
CTNS-202ENST00000381870 CST7O76096 145 aa13.06□□□□□ -0.32
CTNS-202ENST00000381870 OPRM1P35372 400 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms