RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 CAPSLQ8WWF8 208 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 EME1Q96AY2 570 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 AKR1E2Q96JD6 320 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 DCLRE1BQ9H816 532 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
VCX3A-201ENST00000381089 K7N7A8 449 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 SYNGR1O43759 233 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF254O75437 659 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 DHRS3O75911 302 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 PEX2P28328 305 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 EDDM3BP56851 147 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 ESRRGP62508 458 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 SLC34A1Q06495 639 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 DEFB121Q5J5C9 76 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 CLVS2Q5SYC1 327 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 MINOS1Q5TGZ0 78 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 LPCAT4Q643R3 524 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 CENPVQ7Z7K6 275 aaPredicted RBP12.87□□□□□ -0.35
VCX3A-201ENST00000381089 CPOQ8IVL8 374 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 ASB17Q8WXJ9 295 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 RCC1LQ96I51 464 aaKnown RBP12.87□□□□□ -0.35
VCX3A-201ENST00000381089 OR8B4Q96RC9 309 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 NRIP2Q9BQI9 281 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 RIBC2Q9H4K1 309 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 SLC22A13Q9Y226 551 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 TMEM14AQ9Y6G1 99 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 MINOS1-NBL1R4GNA1 71 aa12.87□□□□□ -0.35
VCX3A-201ENST00000381089 DLGAP1O14490 977 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 CHRM2P08172 466 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 IGHV1-8P0DP01 117 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 OSMP13725 252 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 RIDAP52758 137 aaKnown RBP12.86□□□□□ -0.35
VCX3A-201ENST00000381089 DLX6P56179 175 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 BLCAPP62952 87 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 CD83Q01151 205 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 IL18R1Q13478 541 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 KDM4DQ6B0I6 523 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 ZBTB49Q6ZSB9 765 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 C16orf82Q7Z2V1 217 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF679Q8IYX0 411 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 NDNFQ8TB73 568 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 DNAJC9Q8WXX5 260 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF714Q96N38 554 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 TEAD3Q99594 435 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 SLC29A1Q99808 456 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 OCSTAMPQ9BR26 566 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 MOB1AQ9H8S9 216 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 HES4Q9HCC6 221 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 NUFIP1Q9UHK0 495 aaKnown RBP12.86□□□□□ -0.35
VCX3A-201ENST00000381089 GTF2A1LQ9UNN4 478 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 HILPDAQ9Y5L2 63 aa12.86□□□□□ -0.35
VCX3A-201ENST00000381089 TSSC4Q9Y5U2 329 aaPredicted RBP12.86□□□□□ -0.35
VCX3A-201ENST00000381089 TCRBV4S1A1TA0A5B7 111 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 hADV38S2A0JD32 116 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 E9PQ18 207 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 K7EIL1 84 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 PSMD9O00233 223 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 IGLV3-1P01715 115 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 ALDH3A2P51648 485 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 ARHGDIBP52566 201 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 COL10A1Q03692 680 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 MEF2CQ06413 473 aaPredicted RBP12.85□□□□□ -0.35
VCX3A-201ENST00000381089 TMEM95Q3KNT9 176 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 OR4X2Q8NGF9 303 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 DPF1Q92782 380 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 GPR173Q9NS66 373 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 IKZF2Q9UKS7 526 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 ORC6Q9Y5N6 252 aa12.85□□□□□ -0.35
VCX3A-201ENST00000381089 PQLC2LA1A4F0 135 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ATP6V1G2O95670 118 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ALPLP05186 524 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 MPZP25189 248 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 HCCSP53701 268 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ACTA2P62736 377 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ACTG2P63267 376 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ACTC1P68032 377 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ACTA1P68133 377 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ROM1Q03395 351 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 APOFQ13790 326 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ZIK1Q3SY52 487 aaPredicted RBP12.84□□□□□ -0.35
VCX3A-201ENST00000381089 TMEM236Q5W0B7 351 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 ZNF676Q8N7Q3 588 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 PKIBQ9C010 78 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 SLC7A11Q9UPY5 501 aa12.84□□□□□ -0.35
VCX3A-201ENST00000381089 LOC110117498-PIK3R3F6TDL0 507 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
VCX3A-201ENST00000381089 SLC2A5P22732 501 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 EPHA2P29317 976 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 BRS3P32247 399 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.36
VCX3A-201ENST00000381089 CRISP1P54107 249 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 CD69Q07108 199 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 IL24Q13007 206 aa12.83□□□□□ -0.36
VCX3A-201ENST00000381089 DCTN2Q13561 401 aaKnown RBP12.83□□□□□ -0.36
VCX3A-201ENST00000381089 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms