RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 F5H5P2 479 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 L7N2F9 121 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 SULT2B1O00204 365 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 SPRY3O43610 288 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TSC22D2O75157 780 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 B3GALNT1O75752 331 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 KLF7O75840 302 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 OR2C1O95371 312 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 CD8AP01732 235 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 RLN1P04808 185 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 GP1BAP07359 652 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 LIFP15018 202 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 ZNF24P17028 368 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 HLA-GP17693 338 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 CXCL2P19875 107 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MSR1P21757 451 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 NFYAP23511 347 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 SFTPDP35247 375 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 ZNF93P35789 620 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 ALDH3B1P43353 468 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 CSNK1A1P48729 337 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 CX3CR1P49238 355 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 SUCLG1P53597 346 aaKnown RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 ZNF121P58317 390 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 MLF1P58340 268 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 SEC61A1P61619 476 aaKnown RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 CSNK2A1P68400 391 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 MFAP5Q13361 173 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 EXOSC2Q13868 293 aaKnown RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 TAF13Q15543 124 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 GRK1Q15835 563 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PNLIPRP3Q17RR3 467 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MOGAT2Q3SYC2 334 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TMEM176BQ3YBM2 270 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 KRTCAP3Q53RY4 240 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PRAMEF20Q5VT98 475 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR10K2Q6IF99 312 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 IDO2Q6ZQW0 420 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 GPAT4Q86UL3 456 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 FJX1Q86VR8 437 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR5AS1Q8N127 324 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TMEM123Q8N131 208 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MUC20Q8N307 709 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 BPIFB2Q8N4F0 458 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 ARL6IP6Q8N6S5 226 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 ZDHHC22Q8N966 263 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR52B4Q8NGK2 314 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR5D14Q8NGL3 314 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR5M8Q8NGP6 311 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR5M1Q8NGP8 315 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR13C8Q8NGS7 320 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR13C9Q8NGT0 318 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 OR51E1Q8TCB6 317 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TNFAIP8L1Q8WVP5 186 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 MR1Q95460 341 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 INTS12Q96CB8 462 aaKnown RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 C10orf35Q96D05 121 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PERPQ96FX8 193 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 C1orf147Q96MC9 270 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 NAA11Q9BSU3 229 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 CHIAQ9BZP6 476 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 EXO5Q9H790 373 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 TMEM185BQ9H7F4 350 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 AKIRIN1Q9H9L7 192 aaPredicted RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 PROK2Q9HC23 129 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 GPR84Q9NQS5 396 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.13□□□□□ -1.75
USP48-202ENST00000374730 MED9Q9NWA0 146 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 KIF25Q9UIL4 384 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PLEKHA6Q9Y2H5 1048 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PTRH2Q9Y3E5 179 aaKnown RBP4.13□□□□□ -1.75
USP48-202ENST00000374730 MAB21L2Q9Y586 359 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 FLVCR1Q9Y5Y0 555 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 UNC79Q9P2D8 2635 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 KMT2EQ8IZD2 1858 aa4.13□□□□□ -1.75
USP48-202ENST00000374730 PKD1L2Q7Z442 2459 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 NSG1A0A0A6YYJ2 146 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CLEC18AA5D8T8 446 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RFPL4AA6NLU0 287 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 DHRS7CA6NNS2 312 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CEACAM18A8MTB9 384 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RFPL4AL1F8VTS6 287 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GOSR2O14653 212 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RAMP1O60894 148 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CA11O75493 328 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RP2O75695 350 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CBR3O75828 277 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 TOXO94900 526 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 GOSR1O95249 250 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 APOC1P02654 83 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 OR4E1P0C645 316 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ZNF883P0CG24 379 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CCL3P10147 92 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RRASP10301 218 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CCL4P13236 92 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ZNF35P13682 527 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 RPA2P15927 270 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 ACP1P24666 158 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 SSTR2P30874 369 aa4.12□□□□□ -1.75
USP48-202ENST00000374730 CALCRP30988 508 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms