RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TSPAN13O95857 204 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 OR2W3Q7Z3T1 314 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 UBE2ZQ9H832 354 aaPredicted RBP11.17□□□□□ -0.62
HCFC1-202ENST00000369984 MMP24Q9Y5R2 645 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM218A2RU14 115 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 DNPH1O43598 174 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 FCMRO60667 390 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 FGF8P55075 233 aaPredicted RBP11.17□□□□□ -0.62
HCFC1-202ENST00000369984 TCTAP57738 103 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 ARRDC1Q8N5I2 433 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 FAM24BQ8N5W8 94 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 APOBEC3DQ96AK3 386 aaPredicted RBP11.17□□□□□ -0.62
HCFC1-202ENST00000369984 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
HCFC1-202ENST00000369984 NPAS1Q99742 590 aa11.17□□□□□ -0.62
HCFC1-202ENST00000369984 RHOBP62745 196 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ST3GAL2Q16842 350 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 CARFQ8N187 725 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 FGF22Q9HCT0 170 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 TCFL5Q9UL49 500 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 CD96P40200 585 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 PCP4P48539 62 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 VMA21Q3ZAQ7 101 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SPINK9Q5DT21 86 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 Q8IYB0 196 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 NEIL1Q96FI4 390 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 RNF2Q99496 336 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 C6orf106Q9H6K1 298 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM9BQ9NQ34 198 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 B9D1Q9UPM9 204 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 OR1F12Q8NHA8 337 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 FAM210BQ96KR6 192 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 MRPL37Q9BZE1 423 aaKnown RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 CHRNA7P36544 502 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 DSCR4P56555 118 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SLC38A11Q08AI6 406 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 GAMTQ14353 236 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 PLA1AQ53H76 456 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 MRGPREQ86SM8 312 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SLC26A10Q8NG04 563 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 OR1B1Q8NGR6 318 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ARHGAP5-AS1Q96IT6 56 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 OCIAD1Q9NX40 245 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 NPTNQ9Y639 398 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SLC17A2O00624 439 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SEMA7AO75326 666 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 KIR2DS2P43631 304 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 DOLPP1Q86YN1 238 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 FADS6Q8N9I5 356 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM116Q8NCL8 245 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 SARAFQ96BY9 339 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 TMEM140Q9NV12 185 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 C9orf170A2RU37 121 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ABLIM3O94929 683 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 COMPP49747 757 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ZXDAP98168 799 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 HLXQ14774 488 aaPredicted RBP11.16□□□□□ -0.62
HCFC1-202ENST00000369984 OR8D4Q8NGM9 314 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 PLPPR2Q96GM1 343 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 ZNF391Q9UJN7 358 aa11.16□□□□□ -0.62
HCFC1-202ENST00000369984 TOX2Q96NM4 488 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 DOK1Q99704 481 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 RGPD3A6NKT7 1758 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-202ENST00000369984 MASP2O00187 686 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 PNLIPRP2P54317 469 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 NTNG2Q96CW9 530 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CYSLTR2Q9NS75 346 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 OOEPA6NGQ2 149 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 DEFB108AA8MXU0 73 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CDRT15L2A8MXV6 281 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 RAB40CQ96S21 281 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-202ENST00000369984 MRPS16Q9Y3D3 137 aaKnown RBP11.15□□□□□ -0.62
HCFC1-202ENST00000369984 FUT3P21217 361 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CAMPP49913 170 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 ERVS71-1P61550 626 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 OTOSQ8NHW6 89 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 ZNF764Q96H86 408 aaPredicted RBP11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CXCL16Q9H2A7 254 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 NRXN3Q9Y4C0 1643 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 ETHE1O95571 254 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 RPL30P62888 115 aaKnown RBP11.15□□□□□ -0.62
HCFC1-202ENST00000369984 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
HCFC1-202ENST00000369984 CYR61O00622 381 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 ETFBKMTQ8IXQ9 262 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 ASB1Q9Y576 335 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 TMEM238LA0A1B0GVL6 79 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 MED19A0JLT2 244 aaPredicted RBP11.15□□□□□ -0.63
HCFC1-202ENST00000369984 SERTM1A2A2V5 107 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 A6NJY4 79 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 NDUFB3O43676 98 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 CXCL13O43927 109 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 KLF7O75840 302 aaPredicted RBP11.15□□□□□ -0.63
HCFC1-202ENST00000369984 BCL3P20749 454 aa11.15□□□□□ -0.63
HCFC1-202ENST00000369984 DHRS2Q13268 280 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms