RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TRBV23-1A0A0A0MS06 115 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 SNRPGP15A8MWD9 76 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 PTP4A3O75365 173 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CIB3Q96Q77 187 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CHRNA10Q9GZZ6 450 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CXXC4Q9H2H0 198 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 BOLA1Q9Y3E2 137 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 TRAV38-1A0A0B4J264 116 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 H0Y8G0 127 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CDIPTO14735 213 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 KRASP01116 189 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 IGHA1P01876 353 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 HLA-DOBP13765 273 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 LINC00303Q3SY05 128 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 KRTCAP3Q53RY4 240 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 SLC25A30Q5SVS4 291 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 TIPARPQ7Z3E1 657 aaKnown RBP10.2□□□□□ -0.78
SYNE1-204ENST00000367248 LYG2Q86SG7 212 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 AKR1E2Q96JD6 320 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 SLIRPQ9GZT3 109 aaKnown RBP10.2□□□□□ -0.78
SYNE1-204ENST00000367248 F6UZH7 168 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 SMLR1H3BR10 107 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CSRP3P50461 194 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 IGLV3-21P80748 117 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-204ENST00000367248 INO80CQ6PI98 192 aaPredicted RBP10.2□□□□□ -0.78
SYNE1-204ENST00000367248 TAAR6Q96RI8 345 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 FCGR3BO75015 233 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 MMP16P51512 607 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 TSPO2Q5TGU0 170 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 OR10P1Q8NGE3 313 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 ADAMTS17Q8TE56 1095 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 TMPRSS13Q9BYE2 586 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 CLN8Q9UBY8 286 aa10.2□□□□□ -0.78
SYNE1-204ENST00000367248 OR4C45A6NMZ5 311 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 SNAPINO95295 136 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 KCNJ3P48549 501 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 NPTNQ9Y639 398 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 SSSCA1O60232 199 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 TIAF1O95411 115 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 HOXD4P09016 255 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 OR2G3Q8NGZ4 309 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 SLC25A40Q8TBP6 338 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF230Q9UIE0 474 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 DXOO77932 396 aaKnown RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 C1QCP02747 245 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 OR4A8P0C604 315 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 VMA21Q3ZAQ7 101 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 MS4A5Q9H3V2 200 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 CSAG2Q9Y5P2 127 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 C1orf196B1AJZ1 125 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 EFEMP2O95967 443 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 ZBTB25P24278 435 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 C6orf201Q7Z4U5 140 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 SLC26A10Q8NG04 563 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 PRSS27Q9BQR3 290 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 PLEKHA2Q9HB19 425 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 CACFD1Q9UGQ2 172 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 TMEM272A0A1B0GTI8 110 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 hADV38S2A0JD32 116 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 OGG1O15527 345 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 HOXD11P31277 338 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 PRRX1P54821 245 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 OR2F1Q13607 317 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 MDP1Q86V88 176 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 WNK3Q9BYP7 1800 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 K7EQM0 130 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 PRSS53Q2L4Q9 553 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF528Q3MIS6 628 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 TMEM128Q5BJH2 165 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF770Q6IQ21 691 aaPredicted RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 TMUB2Q71RG4 321 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
SYNE1-204ENST00000367248 STRAPQ9Y3F4 350 aaKnown RBP10.19□□□□□ -0.78
SYNE1-204ENST00000367248 C1QBP02746 253 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 Q3ZCU0 254 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 TRAT1Q6PIZ9 186 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 NHLRC1Q6VVB1 395 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 COA4Q9NYJ1 87 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 H3BP45 60 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 NDUFA6P56556 154 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 SOHLH1Q5JUK2 328 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 ACOT7LQ6ZUV0 252 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 FAM214BQ7L5A3 538 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 ST8SIA2Q92186 375 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 MTFP1Q9UDX5 166 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 LIPGQ9Y5X9 500 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 TAAR5O14804 337 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 CTAG2O75638 210 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 MDH2P40926 338 aaKnown RBP10.18□□□□□ -0.78
SYNE1-204ENST00000367248 FUT5Q11128 374 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 OR2T6Q8NHC8 308 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 WDFY2Q96P53 400 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 CCL19Q99731 98 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 FAAP24Q9BTP7 215 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 CNTD2Q9H8S5 307 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 COX6A1P12074 109 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 S100A12P80511 92 aa10.18□□□□□ -0.78
SYNE1-204ENST00000367248 PCOLCEQ15113 449 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms