RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZFP62Q8NB50 900 aaPredicted RBP19.58■□□□□ 0.72
LDB1-201ENST00000361198 BORCS8Q96FH0 119 aa19.58■□□□□ 0.72
LDB1-201ENST00000361198 C1QTNF5Q9BXJ0 243 aa19.58■□□□□ 0.72
LDB1-201ENST00000361198 SERPINE3A8MV23 424 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 SIGLEC5O15389 551 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 CD79AP11912 226 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 RPS2P15880 293 aaKnown RBP19.57■□□□□ 0.72
LDB1-201ENST00000361198 SNU13P55769 128 aaKnown RBP19.57■□□□□ 0.72
LDB1-201ENST00000361198 TAS2R46P59540 309 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 DEFA5Q01523 94 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 ZNF100Q8IYN0 542 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 DEFB124Q8NES8 71 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 METTL9Q9H1A3 318 aa19.57■□□□□ 0.72
LDB1-201ENST00000361198 ATP6V1G2-DDX39BF2Z307 99 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ZNHIT1O43257 154 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ADAP1O75689 374 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 HTR3BO95264 441 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 HLA-HP01893 362 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 CD46P15529 392 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 SLC10A1Q14973 349 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 SLC9A3R2Q15599 337 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 OR8B8Q15620 311 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ANKRD55Q3KP44 614 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 PRSS54Q6PEW0 395 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ZNF724A8MTY0 619 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 OR3A2P47893 321 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 IL15RAQ13261 267 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 RSU1Q15404 277 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 STK11Q15831 433 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 NKX6-2Q9C056 277 aaPredicted RBP19.56■□□□□ 0.72
LDB1-201ENST00000361198 PRDM14Q9GZV8 571 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 DEFB127Q9H1M4 99 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 PLEKHJ1Q9NW61 149 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ZFHX4Q86UP3 3567 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 ZNF318Q5VUA4 2279 aa19.56■□□□□ 0.72
LDB1-201ENST00000361198 TMEM218A2RU14 115 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 ZNF503-AS2A6NEH8 195 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CA11O75493 328 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 ATG12O94817 140 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CSTBP04080 98 aaKnown RBP19.55■□□□□ 0.72
LDB1-201ENST00000361198 PI3P19957 117 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 LHFPL2Q6ZUX7 228 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 APH1AQ96BI3 265 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 AQP10Q96PS8 301 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 ACKR4Q9NPB9 350 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 SDCBPO00560 298 aaPredicted RBP19.55■□□□□ 0.72
LDB1-201ENST00000361198 XRCC2O43543 280 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CCNOP22674 350 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 SURF2Q15527 256 aaPredicted RBP19.55■□□□□ 0.72
LDB1-201ENST00000361198 NKAPLQ5M9Q1 402 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 COLCA1Q6ZS62 124 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 NAXEQ8NCW5 288 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CSNK2A3Q8NEV1 391 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 RNF141Q8WVD5 230 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 PIGCQ92535 297 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 SPSB4Q96A44 273 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CPNE2Q96FN4 548 aaPredicted RBP19.55■□□□□ 0.72
LDB1-201ENST00000361198 RNF122Q9H9V4 155 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 ASF1BQ9NVP2 202 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 ZNF581Q9P0T4 197 aa19.55■□□□□ 0.72
LDB1-201ENST00000361198 CNOT1A5YKK6 2376 aaKnown RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 PRRC2CQ9Y520 2896 aaKnown RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 SPAARA0A1B0GVQ0 90 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 FIGNL2A6NMB9 653 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 CCL2P13500 99 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 ARG2P78540 354 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 ZNF169Q14929 603 aaPredicted RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 ARL6IP1Q15041 203 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 TAF9Q16594 264 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 RNFT1Q5M7Z0 435 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 NUFIP2Q7Z417 695 aaKnown RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 CLRN3Q8NCR9 226 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 NARS2Q96I59 477 aaKnown RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 IGKV1-12A0A0C4DH73 117 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 FAM74A7A6NL05 159 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 ABCD4O14678 606 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 IGKV1D-12P01611 117 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 SERPINA5P05154 406 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 FTH1P19P0C7X4 201 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 FAM74A3Q4VXF1 159 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 TMPRSS7Q7RTY8 843 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 EMG1Q92979 244 aaKnown RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 C2orf50Q96LR7 162 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 ZNF701Q9NV72 531 aaPredicted RBP19.54■□□□□ 0.72
LDB1-201ENST00000361198 ATPIF1Q9UII2 106 aa19.54■□□□□ 0.72
LDB1-201ENST00000361198 MSGN1A6NI15 193 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 NUDT19A8MXV4 375 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 ACTL6AO96019 429 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 FAM157CP0CG43 387 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 ARHGDIBP52566 201 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 PPA1Q15181 289 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 RNPS1Q15287 305 aaKnown RBP19.53■□□□□ 0.72
LDB1-201ENST00000361198 ZNF766Q5HY98 468 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 ASCL4Q6XD76 172 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 VASH2Q86V25 355 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 OR10C1Q96KK4 312 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 HDHD3Q9BSH5 251 aaPredicted RBP19.53■□□□□ 0.72
LDB1-201ENST00000361198 ZNF552Q9H707 407 aaPredicted RBP19.53■□□□□ 0.72
LDB1-201ENST00000361198 EHFQ9NZC4 300 aa19.53■□□□□ 0.72
LDB1-201ENST00000361198 OR5AC2Q9NZP5 309 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms