RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 KIR2DS1A0A191URI9 304 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 SIGLEC5O15389 551 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 ENSAO43768 121 aaKnown RBP12.63□□□□□ -0.39
UBE3B-201ENST00000340074 ANGPTL7O43827 346 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 CYB5AP00167 134 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 CD1AP06126 327 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 BCL3P20749 454 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 EEF1B2P24534 225 aaKnown RBP12.63□□□□□ -0.39
UBE3B-201ENST00000340074 CEBPDP49716 269 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-201ENST00000340074 KISS1Q15726 138 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 ZNRF1Q8ND25 227 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 SDSLQ96GA7 329 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 RBFOX1Q9NWB1 397 aaKnown RBP12.63□□□□□ -0.39
UBE3B-201ENST00000340074 SLC25A10Q9UBX3 287 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-201ENST00000340074 OR14J1Q9UGF5 321 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 AUP1Q9Y679 476 aa12.63□□□□□ -0.39
UBE3B-201ENST00000340074 A0A1W2PPK0 400 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 ECDO95905 644 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 KNG1P01042 644 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 PRDX2P32119 198 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 MAP2K4P45985 399 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 C1QL2Q7Z5L3 287 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 SATL1Q86VE3 508 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 OR52N4Q8NGI2 321 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 NANPQ8TBE9 248 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 EMG1Q92979 244 aaKnown RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 METRNQ9UJH8 293 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 RPUSD1Q9UJJ7 312 aaKnown RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 IGKV1-12A0A0C4DH73 117 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 ZNF879B4DU55 563 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 GPR37O15354 613 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 MAGEB3O15480 346 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 IGKV1D-12P01611 117 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 CALCBP10092 127 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 NDUFB7P17568 137 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 IGFBP3P17936 291 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 ZP1P60852 638 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 PPP3R1P63098 170 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 C11orf91Q3C1V1 193 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 Q8IYB0 196 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 ZNF561Q8N587 486 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 TEX29Q8N6K0 151 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 PNLDC1Q8NA58 520 aaKnown RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 TMEM185AQ8NFB2 350 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 H1FXQ92522 213 aaKnown RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 NKX3-1Q99801 234 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 ELL3Q9HB65 397 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-201ENST00000340074 IL36RNQ9UBH0 155 aa12.62□□□□□ -0.39
UBE3B-201ENST00000340074 TRAV8-7A0A075B6U6 113 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 ALDOBP05062 364 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 LIPFP07098 398 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 CAV3P56539 151 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 GABARAPL2P60520 117 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 INSL4Q14641 139 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 LIPKQ5VXJ0 399 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 SAXO1Q8IYX7 474 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 FAM58AQ8N1B3 248 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 ZSCAN4Q8NAM6 433 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-201ENST00000340074 CPNE2Q96FN4 548 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-201ENST00000340074 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 GPER1Q99527 375 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 TMED9Q9BVK6 235 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 TMEM138Q9NPI0 162 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 CKLFQ9UBR5 152 aa12.61□□□□□ -0.39
UBE3B-201ENST00000340074 MAGEA13PA6NCF6 341 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 GABRPO00591 440 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 PIN1P1O15428 100 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 GPX5O75715 221 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 KDM4BO94953 1096 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 FSHBP01225 129 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 IFNA2P01563 188 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 SFTPBP07988 381 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 PRKACAP17612 351 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 BDKRB2P30411 391 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 TGFBR2P37173 567 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 CAPZA1P52907 286 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 SNU13P55769 128 aaKnown RBP12.6□□□□□ -0.39
UBE3B-201ENST00000340074 FGF12P61328 243 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 COL10A1Q03692 680 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 GPR50Q13585 617 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 ARMCX4Q5H9R4 360 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 MS4A15Q8N5U1 240 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 UFD1Q92890 307 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 DCTN5Q9BTE1 182 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 NOX4Q9NPH5 578 aa12.6□□□□□ -0.39
UBE3B-201ENST00000340074 PPIAL4GP0DN37 164 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 FSTP19883 344 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 DUSP1P28562 367 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 ZNF93P35789 620 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-201ENST00000340074 ARF6P62330 175 aa12.59□□□□□ -0.39
UBE3B-201ENST00000340074 MLLT11Q13015 90 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-201ENST00000340074 TBCEQ15813 527 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-201ENST00000340074 ACSM3Q53FZ2 586 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms