RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 WNT10AQ9GZT5 417 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
LINC01116-202ENST00000339037 NUFIP1Q9UHK0 495 aaKnown RBP12.6□□□□□ -0.39
LINC01116-202ENST00000339037 RYR3Q15413 4870 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 MAGEB4O15481 346 aaPredicted RBP12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ZNF254O75437 659 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 SRSF10O75494 262 aaKnown RBP12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ALDOBP05062 364 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
LINC01116-202ENST00000339037 DLX6P56179 175 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ATP6AP1Q15904 470 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 CLVS2Q5SYC1 327 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 SLX4IPQ5VYV7 408 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 PLEKHG7Q6ZR37 379 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ASRGL1Q7L266 308 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 BATF2Q8N1L9 274 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 TCEANCQ8N8B7 351 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ASCC1Q8N9N2 400 aaKnown RBP12.59□□□□□ -0.39
LINC01116-202ENST00000339037 ADGRL4Q9HBW9 690 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 HES4Q9HCC6 221 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 IKZF2Q9UKS7 526 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 TMEM14AQ9Y6G1 99 aa12.59□□□□□ -0.39
LINC01116-202ENST00000339037 PQLC2LA1A4F0 135 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 G3V2T6 193 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 K7N7A8 449 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 F2RL2O00254 374 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 DLGAP1O14490 977 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 RBP4P02753 201 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 TTRP02766 147 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 ZNF728P0DKX0 622 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 MPZP25189 248 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 VDAC2P45880 294 aaPredicted RBP12.58□□□□□ -0.4
LINC01116-202ENST00000339037 CXCR4P61073 352 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 EFNB1P98172 346 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 DYNC1I2Q13409 638 aaKnown RBP12.58□□□□□ -0.4
LINC01116-202ENST00000339037 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 AADACL4Q5VUY2 407 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 FOXB2Q5VYV0 432 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 NXNL2Q5VZ03 156 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 TMEM42Q69YG0 159 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 C12orf73Q69YU5 71 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 KDM4DQ6B0I6 523 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 ZNF322Q6U7Q0 402 aaPredicted RBP12.58□□□□□ -0.4
LINC01116-202ENST00000339037 MEPCEQ7L2J0 689 aaKnown RBP12.58□□□□□ -0.4
LINC01116-202ENST00000339037 SLC35F2Q8IXU6 374 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 OR11H6Q8NGC7 330 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 TMEM163Q8TC26 289 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 ASB17Q8WXJ9 295 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 PRRG3Q9BZD7 231 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 GABARAPL1Q9H0R8 117 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 GPR173Q9NS66 373 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
LINC01116-202ENST00000339037 GTF2A1LQ9UNN4 478 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 SLC22A13Q9Y226 551 aa12.58□□□□□ -0.4
LINC01116-202ENST00000339037 MEX3AA1L020 520 aaKnown RBP12.57□□□□□ -0.4
LINC01116-202ENST00000339037 IGHV1-8P0DP01 117 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 DYNLT3P51808 116 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 EDDM3BP56851 147 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 OR12D2P58182 307 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 BLCAPP62952 87 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 TMEM95Q3KNT9 176 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 GDPD3Q7L5L3 318 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 AMIGO2Q86SJ2 522 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 IL4I1Q96RQ9 567 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 MOB1AQ9H8S9 216 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 DNAH9Q9NYC9 4486 aa12.57□□□□□ -0.4
LINC01116-202ENST00000339037 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 PF4V1P10720 104 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 IGLL1P15814 213 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 FASP25445 335 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 ERVK11-1P61568 191 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 COL10A1Q03692 680 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 SLC34A1Q06495 639 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 BCL2L15Q5TBC7 163 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 Q6ZS46 218 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 SSX6Q7RTT6 188 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 WFDC9Q8NEX5 89 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 CIB1Q99828 191 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 MRM2Q9UI43 246 aaKnown RBP12.56□□□□□ -0.4
LINC01116-202ENST00000339037 HILPDAQ9Y5L2 63 aa12.56□□□□□ -0.4
LINC01116-202ENST00000339037 A0A1B0GTI1 187 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 A6NIN4 97 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ZNF737O75373 536 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 MPIG6BO95866 241 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 CHRM2P08172 466 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 JUNBP17275 347 aaPredicted RBP12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ACTA2P62736 377 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ACTG2P63267 376 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ACTC1P68032 377 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ACTA1P68133 377 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 IL24Q13007 206 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 MINOS1Q5TGZ0 78 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ANGPTL5Q86XS5 388 aa12.55□□□□□ -0.4
LINC01116-202ENST00000339037 ZDHHC13Q8IUH4 622 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms