RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 HPP00738 406 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 TEX261Q6UWH6 196 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 ADGRG3Q86Y34 549 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 C2orf50Q96LR7 162 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 ZNF251Q9BRH9 671 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 EXOGQ9Y2C4 368 aaKnown RBP9.03□□□□□ -0.96
CHD3-201ENST00000330494 U3KQ87 197 aa9.03□□□□□ -0.96
CHD3-201ENST00000330494 K7EQM0 130 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 PLPP2O43688 288 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 RBP4P02753 201 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 ZBTB25P24278 435 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 MEOX2P50222 304 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 D2HGDHQ8N465 521 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 OR5V1Q9UGF6 321 aa9.02□□□□□ -0.96
CHD3-201ENST00000330494 E5RGE8 158 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 LY86O95711 162 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 ADIPOR1Q96A54 375 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 ADGRG7Q96K78 797 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 NSG2Q9Y328 171 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 FAM157AC9JC47 383 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 IL11P20809 199 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 PTTG1IPP53801 180 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 Q3ZCU0 254 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
CHD3-201ENST00000330494 C9orf40Q8IXQ3 194 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 DUSP15Q9H1R2 295 aaPredicted RBP9.02□□□□□ -0.97
CHD3-201ENST00000330494 COX7A2P2O60397 106 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 SLC25A4P12235 298 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 TBPP20226 339 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 SLC35D1Q9NTN3 355 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 IGHV3OR15-7A0A075B7D8 119 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 TCAPO15273 167 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 USF1P22415 310 aaPredicted RBP9.02□□□□□ -0.97
CHD3-201ENST00000330494 PAX6P26367 422 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 CSF2RBP32927 897 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 KLF3P57682 345 aaPredicted RBP9.02□□□□□ -0.97
CHD3-201ENST00000330494 HFEQ30201 348 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 GPR87Q9BY21 358 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 NXF2Q9GZY0 626 aaKnown RBP9.02□□□□□ -0.97
CHD3-201ENST00000330494 SLC2A9Q9NRM0 540 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 ZNF586Q9NXT0 402 aa9.02□□□□□ -0.97
CHD3-201ENST00000330494 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ADAM20O43506 726 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 APELAP0DMC3 54 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 CSN1S1P47710 185 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 RPL7L1Q6DKI1 246 aaKnown RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 LSMEM1Q8N8F7 131 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 SLIRPQ9GZT3 109 aaKnown RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 JTBO76095 146 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 AQP8O94778 261 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 OR5AP2Q8NGF4 316 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 MRM2Q9UI43 246 aaKnown RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 ADH4P08319 380 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 CDC20Q12834 499 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ZBTB37Q5TC79 503 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 MRM1Q6IN84 353 aaKnown RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 VAMP8Q9BV40 100 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ZDHHC11Q9H8X9 412 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 PATJQ8NI35 1801 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 TBX19O60806 448 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 IGHA2P01877 340 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ACSM4P0C7M7 580 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 OR2F1Q13607 317 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 TMEM108Q6UXF1 575 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 FAM219AQ8IW50 185 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 SMIM4Q8WVI0 70 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 LHX4Q969G2 390 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 MOB3AQ96BX8 217 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 OR2D2Q9H210 308 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 GPR31O00270 319 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 CTSBP07858 339 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 BCL3P20749 454 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 MVDP53602 400 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ACOT6Q3I5F7 207 aaPredicted RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 OR13G1Q8NGZ3 307 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ACTR3CQ9C0K3 210 aaPredicted RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 HIST1H1DP16402 221 aaKnown RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 TNFRSF1AP19438 455 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 CD96P40200 585 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 H3F3AP84243 136 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ST3GAL2Q16842 350 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 SP7Q8TDD2 431 aaPredicted RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 LRFN3Q9BTN0 628 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 ZNF275Q9NSD4 429 aaPredicted RBP9.01□□□□□ -0.97
CHD3-201ENST00000330494 CCL27Q9Y4X3 112 aa9.01□□□□□ -0.97
CHD3-201ENST00000330494 A0A1B0GUH1 482 aa9□□□□□ -0.97
CHD3-201ENST00000330494 SERPINE3A8MV23 424 aa9□□□□□ -0.97
CHD3-201ENST00000330494 H7BYZ3 331 aa9□□□□□ -0.97
CHD3-201ENST00000330494 LINC01387J3KSC0 135 aa9□□□□□ -0.97
CHD3-201ENST00000330494 CTAG2O75638 210 aa9□□□□□ -0.97
CHD3-201ENST00000330494 SLC36A1Q7Z2H8 476 aa9□□□□□ -0.97
CHD3-201ENST00000330494 LFNGQ8NES3 379 aa9□□□□□ -0.97
CHD3-201ENST00000330494 APOBEC4Q8WW27 367 aaKnown RBP9□□□□□ -0.97
CHD3-201ENST00000330494 DYRK2Q92630 601 aa9□□□□□ -0.97
CHD3-201ENST00000330494 CYSLTR2Q9NS75 346 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms