RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CALHM2Q9HA72 323 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 NECAP2Q9NVZ3 263 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 ST3GAL6Q9Y274 331 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 FREM1Q5H8C1 2179 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 SYNGR4O95473 234 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 FOXG1P55316 489 aaPredicted RBP12.59□□□□□ -0.39
TPM3-206ENST00000330188 NAAAQ02083 359 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
TPM3-206ENST00000330188 STK11Q15831 433 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 LINC00696Q6ZRV3 163 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 CALHM1Q8IU99 346 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 FAM219AQ8IW50 185 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 TMEM251Q8N6I4 163 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
TPM3-206ENST00000330188 LOXL4Q96JB6 756 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 ACKR4Q9NPB9 350 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
TPM3-206ENST00000330188 A0A096LPE4 126 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 TPT1P13693 172 aaKnown RBP12.58□□□□□ -0.4
TPM3-206ENST00000330188 DHRS11Q6UWP2 260 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 SGPP2Q8IWX5 399 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 SLC30A7Q8NEW0 376 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 AQP10Q96PS8 301 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 IL17BQ9UHF5 180 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 PDCD6O75340 191 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 RBM11P57052 281 aaKnown RBP12.58□□□□□ -0.4
TPM3-206ENST00000330188 DAZAP2Q15038 168 aaPredicted RBP12.58□□□□□ -0.4
TPM3-206ENST00000330188 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 FNDC9Q8TBE3 224 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 MS4A7Q9GZW8 240 aaPredicted RBP12.58□□□□□ -0.4
TPM3-206ENST00000330188 TAS2R3Q9NYW6 316 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 GSKIPQ9P0R6 139 aa12.58□□□□□ -0.4
TPM3-206ENST00000330188 LOC105371267A0A1B0GV96 52 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 FAM221AA4D161 298 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 ZNF503-AS2A6NEH8 195 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 ZNHIT1O43257 154 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 FGF16O43320 207 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 HLA-HP01893 362 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 PET100P0DJ07 73 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 PLGLB1Q02325 96 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 AIMP2Q13155 320 aaKnown RBP12.57□□□□□ -0.4
TPM3-206ENST00000330188 PDCD1Q15116 288 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 SLC22A25Q6T423 547 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 ZNF611Q8N823 705 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 OR56B2PQ8NGI1 322 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 REPIN1Q9BWE0 567 aaKnown RBP12.57□□□□□ -0.4
TPM3-206ENST00000330188 PCDHB16Q9NRJ7 776 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 DNAJB11Q9UBS4 358 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 MEMO1Q9Y316 297 aa12.57□□□□□ -0.4
TPM3-206ENST00000330188 ZNF205O95201 554 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 CCL2P13500 99 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 NUBP1P53384 320 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 S100A10P60903 97 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 MALLQ13021 153 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 IAH1Q2TAA2 248 aaPredicted RBP12.56□□□□□ -0.4
TPM3-206ENST00000330188 Q6ZPA2 131 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 TOMM40LQ969M1 308 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 PRRG4Q9BZD6 226 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 RNF122Q9H9V4 155 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 ZNF724A8MTY0 619 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 ZNF728P0DKX0 622 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 COX5BP10606 129 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 CCNOP22674 350 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 NPBWR2P48146 333 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 PIGPP57054 158 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 DHRS13Q6UX07 377 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 SLC25A26Q70HW3 274 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 BATF2Q8N1L9 274 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 OR1S2Q8NGQ3 325 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 FGF23Q9GZV9 251 aaPredicted RBP12.56□□□□□ -0.4
TPM3-206ENST00000330188 ZNF286AQ9HBT8 521 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 CRIM1Q9NZV1 1036 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 PCDHB10Q9UN67 800 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 MED13Q9UHV7 2174 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 AHCTF1Q8WYP5 2266 aa12.56□□□□□ -0.4
TPM3-206ENST00000330188 PQLC2LA1A4F0 135 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 MEOX1P50221 254 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 C3AR1Q16581 482 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 ZNF585AQ6P3V2 769 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 Q8NFD4 153 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 MRPL24Q96A35 216 aaKnown RBP12.55□□□□□ -0.4
TPM3-206ENST00000330188 CNTNAP3BQ96NU0 1288 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 PAPOLGQ9BWT3 736 aaKnown RBP12.55□□□□□ -0.4
TPM3-206ENST00000330188 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 SLC5A7Q9GZV3 580 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 TMEM100Q9NV29 134 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 TNRC6AQ8NDV7 1962 aaKnown RBP12.55□□□□□ -0.4
TPM3-206ENST00000330188 SS18L1O75177 396 aaPredicted RBP12.55□□□□□ -0.4
TPM3-206ENST00000330188 SP1P08047 785 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 FUT3P21217 361 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 PMELP40967 661 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 PRDX4Q13162 271 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 BTN1A1Q13410 526 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 ARHGAP21Q5T5U3 1957 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 HES3Q5TGS1 186 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 GGNBP1Q5YKI7 109 aa12.55□□□□□ -0.4
TPM3-206ENST00000330188 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms