RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 FAM157AC9JC47 383 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 IL2RAP01589 272 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PAX5Q02548 391 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 RAB32Q13637 225 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 C1QTNF12Q5T7M4 302 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 AGBL4Q5VU57 503 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 PLA2G3Q9NZ20 509 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 OR6C3Q9NZP0 311 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 LOXL2Q9Y4K0 774 aa7.09□□□□□ -1.27
CIITA-201ENST00000324288 A0A1B0GV90 55 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 ZNF83P51522 516 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 DYNLT3P51808 116 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 YPEL5P62699 121 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 DHRS2Q13268 280 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 FOCADQ5VW36 1801 aa7.09□□□□□ -1.28
CIITA-201ENST00000324288 CTXN2P0C2S0 81 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 RPS4XP62701 263 aaKnown RBP7.08□□□□□ -1.28
CIITA-201ENST00000324288 ELAVL1Q15717 326 aaKnown RBP7.08□□□□□ -1.28
CIITA-201ENST00000324288 OR5C1Q8NGR4 320 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PHYHIPQ92561 330 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 LYRM4Q9HD34 91 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 TSPAN12O95859 305 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 CRYBB2P43320 205 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 SMIM21Q3B7S5 101 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 OR2A14Q96R47 310 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 CYSLTR2Q9NS75 346 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 LPAR3Q9UBY5 353 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 FOXC1Q12948 553 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 RBFOX3A6NFN3 312 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 CXCL13O43927 109 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 FAM74A7A6NL05 159 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 GPX2P18283 190 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 GFERP55789 205 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 FAM74A3Q4VXF1 159 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PAQR9Q6ZVX9 377 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 BCL2L2Q92843 193 aaPredicted RBP7.08□□□□□ -1.28
CIITA-201ENST00000324288 USP3Q9Y6I4 520 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 IGHV3-43A0A0B4J1X8 118 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 DIRC3C9JPN6 131 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 IGHV3-43DP0DP04 118 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 COX7A1P24310 79 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 LYZP61626 148 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 WDR73Q6P4I2 378 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 SSX8Q7RTT4 187 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 LIPGQ9Y5X9 500 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 KRASP01116 189 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 CD27P26842 260 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PPP2CBP62714 309 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PPP2CAP67775 309 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 SLC35B1P78383 322 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 TRAT1Q6PIZ9 186 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ABI3BPQ7Z7G0 1075 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ZNF683Q8IZ20 524 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ST6GAL2Q96JF0 529 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 TBX15Q96SF7 602 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PRRX2Q99811 253 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 TMEM204Q9BSN7 226 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 GREB1Q4ZG55 1949 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ZNF716A6NP11 495 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PLRG1O43660 514 aaKnown RBP7.08□□□□□ -1.28
CIITA-201ENST00000324288 SMIM6P0DI80 62 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 OR1B1Q8NGR6 318 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 GPR61Q9BZJ8 451 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 IGKV3-7A0A075B6H7 116 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ZNF98A6NK75 572 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 NDUFB6O95139 128 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ABHD3Q8WU67 409 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 POM121L2Q96KW2 1035 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 ABHD14AQ9BUJ0 271 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 CACNG5Q9UF02 275 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 OR10G8Q8NGN5 311 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 UQCC1Q9NVA1 299 aa7.08□□□□□ -1.28
CIITA-201ENST00000324288 PPIHO43447 177 aaKnown RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 ST6GAL1P15907 406 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 MMP15P51511 669 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 FOXF1Q12946 379 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 BPIFA4PQ86YQ2 179 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 SMIM4Q8WVI0 70 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 MS4A6EQ96DS6 147 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 TMEM147Q9BVK8 224 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ZDHHC5Q9C0B5 715 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PRSS12P56730 875 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PLP1P60201 277 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 DLK1P80370 383 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 FZD2Q14332 565 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 OR1C1Q15619 314 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 GFRALQ6UXV0 394 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 VN1R17PQ8TDU5 208 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PDLIM5Q96HC4 596 aaKnown RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 AAMDCQ9H7C9 122 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 C9orf170A2RU37 121 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 DNPH1O43598 174 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 LPAR6P43657 344 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 PTOV1Q86YD1 416 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 SLC26A10Q8NG04 563 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 VN1R1Q9GZP7 353 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 SIAH2O43255 324 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 ANKRD34CP0C6C1 535 aa7.07□□□□□ -1.28
CIITA-201ENST00000324288 RCC1P18754 421 aaPredicted RBP7.07□□□□□ -1.28
CIITA-201ENST00000324288 OPRK1P41145 380 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms