RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 SEC14L6B5MCN3 397 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 YIF1AO95070 293 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 NXF2Q9GZY0 626 aaKnown RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 CXXC4Q9H2H0 198 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 FCGR3BO75015 233 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 BCL3P20749 454 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 MYPOPQ86VE0 399 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 CT55Q8WUE5 264 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 C10orf35Q96D05 121 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 TRGV8A0A0C4DH27 118 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 P2RY1P47900 373 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 GFRALQ6UXV0 394 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 D2HGDHQ8N465 521 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 BARX1Q9HBU1 254 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 CES1P1Q9UKY3 287 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 PSG11Q9UQ72 335 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 ANKRD31Q8N7Z5 1873 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 MYO16Q9Y6X6 1858 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 FGF2P09038 288 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 CST2P09228 141 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 RAB7AP51149 207 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 ZNF83P51522 516 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 INPP5JQ15735 1006 aaPredicted RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 UBALD1Q8TB05 177 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 SF3B5Q9BWJ5 86 aaKnown RBP9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 ST6GALNAC2Q9UJ37 374 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 MKRN2OSH3BPM6 223 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 TNFRSF1AP19438 455 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 SEZ6L2Q6UXD5 910 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 ZAR1Q86SH2 424 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 MOB3BQ86TA1 216 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 FBXL17Q9UF56 701 aa9.66□□□□□ -0.86
SNRNP200-201ENST00000323853 ZNF737O75373 536 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SIGIRRQ6IA17 410 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 CLEC18BQ6UXF7 455 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TOLLIPQ9H0E2 274 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SLC35B3Q9H1N7 401 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 ONECUT1Q9UBC0 465 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 ZNF107Q9UII5 783 aaPredicted RBP9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 PCOLCE2Q9UKZ9 415 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SLC31A2O15432 143 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 LY86O95711 162 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 CD200P41217 278 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 OR5I1Q13606 314 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 ISXQ2M1V0 245 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 Q3ZCU0 254 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 OR10AD1Q8NGE0 317 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TMEM230Q96A57 120 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TRMT61AQ96FX7 289 aaKnown RBP9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 LRFN3Q9BTN0 628 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 PRR13Q9NZ81 148 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 LSM6P62312 80 aaKnown RBP9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SURF2Q15527 256 aaPredicted RBP9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 ZNF79Q15937 498 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 STUMQ69YW2 141 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 CTDSP1Q9GZU7 261 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 WBP1LQ9NX94 342 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TRAV17A0A0B4J275 112 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TRDCB7Z8K6 153 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 PAX6P26367 422 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 DYNLT3P51808 116 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 MICBQ29980 383 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 TMEM91Q6ZNR0 172 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 NUFIP2Q7Z417 695 aaKnown RBP9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SLC25A42Q86VD7 318 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 LINC00052Q96N35 136 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 CACNG5Q9UF02 275 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.86
SNRNP200-201ENST00000323853 SOCS1O15524 211 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 SPINT1O43278 529 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 OR2C3Q8N628 320 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 LRRC29Q8WV35 223 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 TM4SF19Q96DZ7 209 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 FSCN3Q9NQT6 498 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 MBPP02686 304 aaPredicted RBP9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 C1QCP02747 245 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 PATE4P0C8F1 98 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 RD3LP0DJH9 198 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 SPP1P10451 314 aa9.65□□□□□ -0.87
SNRNP200-201ENST00000323853 MPLP40238 635 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 KIR2DL1P43626 348 aaPredicted RBP9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 B3GNTL1Q67FW5 361 aaPredicted RBP9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 TMEM56Q96MV1 263 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 MAP1LC3B2A6NCE7 125 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 CLEC9AQ6UXN8 241 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 GPA33Q99795 319 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 MAP1LC3BQ9GZQ8 125 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 IGHV3-43A0A0B4J1X8 118 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 DBX1A6NMT0 343 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 MASP2O00187 686 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 MOSPD3O75425 235 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 HRASP01112 189 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 IGHV3-43DP0DP04 118 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 CXCL3P19876 107 aa9.64□□□□□ -0.87
SNRNP200-201ENST00000323853 RANP62826 216 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms