RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MTCH1Q9NZJ7 389 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 PIPOXQ9P0Z9 390 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 RRP8O43159 456 aaKnown RBP18.21■□□□□ 0.51
ATG4D-201ENST00000309469 PDCD6O75340 191 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 OR2A4O95047 310 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 PDCD1Q15116 288 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 CHRFAM7AQ494W8 412 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 BRICD5Q6PL45 260 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 ZNF573Q86YE8 665 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 OR2A7Q96R45 310 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 FN3KRPQ9HA64 309 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 EDARQ9UNE0 448 aa18.21■□□□□ 0.51
ATG4D-201ENST00000309469 IGKV1D-8A0A087WSZ0 117 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 MSTNO14793 375 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 RAC2P15153 192 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 FUT3P21217 361 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 RAP2BP61225 183 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 FGF12P61328 243 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 DAZAP2Q15038 168 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-201ENST00000309469 C2orf68Q2NKX9 166 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 TMEM17Q86X19 198 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 C12orf45Q8N5I9 185 aaPredicted RBP18.2■□□□□ 0.5
ATG4D-201ENST00000309469 MARCH1Q8TCQ1 289 aa18.2■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A10PA6NDY2 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A18PA6NE21 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A16PA6NEW6 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A20PA6NIJ5 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A8PA6NJQ4 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A7PA6NKC0 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 OR5H1A6NKK0 313 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A22PA8MWA6 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A12PA8MX19 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A5PA8MXJ8 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A23PA8MXZ1 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 F8VVB4 439 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 F8VWA3 439 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 G3V3Q6 166 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 TRAPPC2LH3BP13 241 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 HOXD4P09016 255 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A15PP0C7V4 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A13PP0C7W8 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A14PP0C7W9 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 FAM90A24PP0C7X0 464 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 ZNF35P13682 527 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 DTYMKP23919 212 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 DHRS2Q13268 280 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 HAGHLQ6PII5 290 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-201ENST00000309469 C3P1Q6ZMU1 363 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 OVCH2Q7RTZ1 564 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 PPA2Q9H2U2 334 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 EHFQ9NZC4 300 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 SDCBPO00560 298 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-201ENST00000309469 SYNGR1O43759 233 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 OR7C1O76099 320 aaPredicted RBP18.19■□□□□ 0.5
ATG4D-201ENST00000309469 IGLV1-44P01699 117 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 S100A1P23297 94 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 Q8NA96 180 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 OR13G1Q8NGZ3 307 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 TMEM165Q9HC07 324 aa18.19■□□□□ 0.5
ATG4D-201ENST00000309469 CEACAM18A8MTB9 384 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 PRSS44E7EML9 344 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 CECR9P0C854 216 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 ZBTB25P24278 435 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 PMELP40967 661 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 NHLRC3Q5JS37 347 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 FAHD2BQ6P2I3 314 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-201ENST00000309469 ZNF474Q6S9Z5 364 aaPredicted RBP18.18■□□□□ 0.5
ATG4D-201ENST00000309469 LHFPL1Q86WI0 220 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 CISD2Q8N5K1 135 aaKnown RBP18.18■□□□□ 0.5
ATG4D-201ENST00000309469 ADAD2Q8NCV1 583 aaKnown RBP18.18■□□□□ 0.5
ATG4D-201ENST00000309469 FAHD2AQ96GK7 314 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 HS3ST6Q96QI5 342 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 OR51I2Q9H344 312 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 AMDHD2Q9Y303 409 aa18.18■□□□□ 0.5
ATG4D-201ENST00000309469 NOP16Q9Y3C1 178 aaKnown RBP18.18■□□□□ 0.5
ATG4D-201ENST00000309469 GOSR2O14653 212 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 HLA-AP01891 365 aaKnown RBP18.17■□□□□ 0.5
ATG4D-201ENST00000309469 FCGR3AP08637 254 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 SELEP16581 610 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 CEACAM8P31997 349 aaPredicted RBP18.17■□□□□ 0.5
ATG4D-201ENST00000309469 NPY4RP50391 375 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 PSG7Q13046 419 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 LYG2Q86SG7 212 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 DYRK2Q92630 601 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 PKIBQ9C010 78 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 ANXA10Q9UJ72 324 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 GPR132Q9UNW8 380 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 OSGIN2Q9Y236 505 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 CACNA1GO43497 2377 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 IQCF6A8MYZ5 107 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 SIX6O95475 246 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 TDGF1P3P51864 188 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 H2BFSP57053 126 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 ARPC4P59998 168 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 IL24Q13007 206 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 PPP1R1AQ13522 171 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 MPPED2Q15777 294 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 GRK1Q15835 563 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 ALKBH6Q3KRA9 238 aa18.17■□□□□ 0.5
ATG4D-201ENST00000309469 UNQ6126/PRO20091Q6UXV3 157 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms