RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CXorf58Q96LI9 332 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 TMPRSS13Q9BYE2 586 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 RHOFQ9HBH0 211 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 RYDENQ9NUL5 291 aaKnown RBP14.11□□□□□ -0.15
USP42-201ENST00000306177 CHEK1O14757 476 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 ADAM20O43506 726 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 ONECUT2O95948 504 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 ACTL6AO96019 429 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CST2P09228 141 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 RAB7AP51149 207 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 NCR3LG1Q68D85 454 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 NHLRC1Q6VVB1 395 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 C10orf35Q96D05 121 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 H0Y8G0 127 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CTDSPLO15194 276 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 AKR1C3P42330 323 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CLLU1Q5K131 121 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 RAB40CQ96S21 281 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 CABLES2Q9BTV7 478 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 SLC26A1Q9H2B4 701 aa14.11□□□□□ -0.15
USP42-201ENST00000306177 BGLAPP02818 100 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 GABRA1P14867 456 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 TMEM211Q6ICI0 200 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 C9orf40Q8IXQ3 194 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 TRMT61AQ96FX7 289 aaKnown RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 TMEM56Q96MV1 263 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 CXXC4Q9H2H0 198 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 TNFAIP6P98066 277 aaPredicted RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 COL13A1Q5TAT6 717 aaPredicted RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 COMMD1Q8N668 190 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 TMEM52Q8NDY8 209 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 OR5D13Q8NGL4 314 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 RFESDQ8TAC1 157 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 ACY3Q96HD9 319 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 PECRQ9BY49 303 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 PSG11Q9UQ72 335 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 GSTZ1O43708 216 aaPredicted RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 DUS4LO95620 317 aaKnown RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 LPAR6P43657 344 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 UQCC1Q9NVA1 299 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 FCGR3BO75015 233 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 SDHBP21912 280 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 HFEQ30201 348 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 LYG1Q8N1E2 194 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 ESRP2Q9H6T0 727 aaKnown RBP14.1□□□□□ -0.15
USP42-201ENST00000306177 SLC35D1Q9NTN3 355 aa14.1□□□□□ -0.15
USP42-201ENST00000306177 DEFB108AA8MXU0 73 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 CCL3P10147 92 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 MAGEA5P43359 124 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 SELENOPP49908 381 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 C2CD4CQ8TF44 421 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 GREB1LQ9C091 1923 aaPredicted RBP14.09□□□□□ -0.15
USP42-201ENST00000306177 XKRY2A2RUG3 117 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 PNLIPP16233 465 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 GNG10P50151 68 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 RPL7L1Q6DKI1 246 aaKnown RBP14.09□□□□□ -0.15
USP42-201ENST00000306177 TUSC5Q8IXB3 177 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 ZNF835Q9Y2P0 537 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 CYTIPO60759 359 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 OR2B8PP59922 312 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 UQCC3Q6UW78 93 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 DUSP18Q8NEJ0 188 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 CHRDL1Q9BU40 450 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 HES4Q9HCC6 221 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 ONECUT1Q9UBC0 465 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 ZNF705AQ6ZN79 300 aaPredicted RBP14.09□□□□□ -0.15
USP42-201ENST00000306177 ZNF721Q8TF20 911 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 GAL3ST2Q9H3Q3 398 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 AMDHD2Q9Y303 409 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 PARP14Q460N5 1801 aa14.09□□□□□ -0.15
USP42-201ENST00000306177 RAB32Q13637 225 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 IRF3Q14653 427 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 GGNBP1Q5YKI7 109 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 ZNF574Q6ZN55 896 aaPredicted RBP14.08□□□□□ -0.16
USP42-201ENST00000306177 GVQW1Q8N7I0 195 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 OR2M3Q8NG83 312 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 BARX1Q9HBU1 254 aaPredicted RBP14.08□□□□□ -0.16
USP42-201ENST00000306177 COLQQ9Y215 455 aaPredicted RBP14.08□□□□□ -0.16
USP42-201ENST00000306177 TIMM9Q9Y5J7 89 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 FCARP24071 287 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 Q3ZCU0 254 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 OR10AD1Q8NGE0 317 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 CA5BP1Q8WTZ4 195 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 PCM1Q15154 2024 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 FAM90A27PA6NNH2 459 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 DTX4Q9Y2E6 619 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 TRIOBPQ9H2D6 2365 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 RBBP6Q7Z6E9 1792 aaKnown RBP14.08□□□□□ -0.16
USP42-201ENST00000306177 OR4C45A6NMZ5 311 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 MPC2O95563 127 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 SLC6A1P30531 599 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 SLC22A18ASQ8N1D0 253 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 OR2D2Q9H210 308 aa14.08□□□□□ -0.16
USP42-201ENST00000306177 hADV38S2A0JD32 116 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 EPOPA6NHQ4 379 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 KIR2DS2P43631 304 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 H3F3AP84243 136 aa14.07□□□□□ -0.16
USP42-201ENST00000306177 TMEM267Q0VDI3 215 aaPredicted RBP14.07□□□□□ -0.16
USP42-201ENST00000306177 FAHD2BQ6P2I3 314 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms