RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 VSTM2LQ96N03 204 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 CACNG5Q9UF02 275 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 GATCO43716 136 aaKnown RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 COX7A2P2O60397 106 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 TMIGD3P0DMS9 266 aaPredicted RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 ARL16Q0P5N6 197 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 PDCD1Q15116 288 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 SMIM21Q3B7S5 101 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 OR2T10Q8NGZ9 312 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 NEIL1Q96FI4 390 aaPredicted RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 USB1Q9BQ65 265 aaKnown RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 KLF13Q9Y2Y9 288 aaPredicted RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 CNIH1O95406 144 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 FAM157BP0CG42 384 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 MDH2P40926 338 aaKnown RBP11.4□□□□□ -0.58
COL3A1-201ENST00000304636 PKIAP61925 76 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 MICBQ29980 383 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 PRR27Q6MZM9 219 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 C19orf35Q6ZS72 473 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 IFI44Q8TCB0 444 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 BOD1Q96IK1 185 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 MANBALQ9NQG1 85 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 MTCH2Q9Y6C9 303 aa11.4□□□□□ -0.58
COL3A1-201ENST00000304636 LMO7DNF2Z398 122 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 RGS7BPQ6MZT1 257 aaPredicted RBP11.4□□□□□ -0.59
COL3A1-201ENST00000304636 FAM181AQ8N9Y4 354 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 OR10A7Q8NGE5 316 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 OR10G4Q8NGN3 311 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 OR10G9Q8NGN4 311 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 OR10G7Q8NGN6 311 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 UBE2ZQ9H832 354 aaPredicted RBP11.4□□□□□ -0.59
COL3A1-201ENST00000304636 OCIAD1Q9NX40 245 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 VSIG4Q9Y279 399 aa11.4□□□□□ -0.59
COL3A1-201ENST00000304636 A0A1W2PQD3 144 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 EFNB2P52799 333 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF362Q5T0B9 420 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF660Q6AZW8 331 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 GTF2H5Q6ZYL4 71 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 SLC26A10Q8NG04 563 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 EGLN1Q9GZT9 426 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 DBX1A6NMT0 343 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 M0QZK8 103 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 FCN1O00602 326 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 GGCTO75223 188 aaKnown RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 CHRNA7P36544 502 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 LPAR6P43657 344 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 ERVS71-1P61550 626 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 IGFBP7Q16270 282 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 TIPARPQ7Z3E1 657 aaKnown RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 MYPOPQ86VE0 399 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 C10orf35Q96D05 121 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 TRIB1Q96RU8 372 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 NRIP2Q9BQI9 281 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 SERTM2A0A1B0GWG4 89 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 PMS2P1A4D2B8 440 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 H3BQ15 152 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 CEACAM6P40199 344 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 FGF8P55075 233 aaPredicted RBP11.39□□□□□ -0.59
COL3A1-201ENST00000304636 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 DCAF12L2Q5VW00 463 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 OR10AC1Q8NH08 325 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 FAM173AQ9BQD7 235 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF355PQ9NSJ1 428 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 FCER1GP30273 86 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 ZNF596Q8TC21 504 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 M1APQ8TC57 530 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 GPBAR1Q8TDU6 330 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 STARD10Q9Y365 291 aa11.39□□□□□ -0.59
COL3A1-201ENST00000304636 A0A1W2PPV9 198 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 TCAPO15273 167 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 GCM2O75603 506 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-201ENST00000304636 WDR73Q6P4I2 378 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 OR6X1Q8NH79 312 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 TMEM147Q9BVK8 224 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 KIAA1324LA8MWY0 1029 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-201ENST00000304636 LINC01387J3KSC0 135 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 SLC31A2O15432 143 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 DUSP2Q05923 314 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 RPEL1Q2QD12 228 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 OR10X1Q8NGY0 326 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 MRPL24Q96A35 216 aaKnown RBP11.38□□□□□ -0.59
COL3A1-201ENST00000304636 POM121L2Q96KW2 1035 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 GINS3Q9BRX5 216 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 TAAR3PQ9P1P4 343 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 PRSS50Q9UI38 385 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 CD226Q15762 336 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 LBHQ53QV2 105 aaPredicted RBP11.38□□□□□ -0.59
COL3A1-201ENST00000304636 TBC1D26Q86UD7 250 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 SLC25A22Q9H936 323 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 VAX2Q9UIW0 290 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 PITPNC1Q9UKF7 332 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 H3BMH7 237 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 FBP1P09467 338 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 GLULP15104 373 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 FAM3AP98173 230 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 DMWDQ09019 674 aa11.38□□□□□ -0.59
COL3A1-201ENST00000304636 GUCA2BQ16661 112 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms