RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 OR1C1Q15619 314 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 MPV17LQ2QL34 196 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 OR11H7Q8NGC8 314 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 RAB37Q96AX2 223 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TBC1D29Q9UFV1 150 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 DIRC3C9JPN6 131 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 F12P00748 615 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 CCR2P41597 374 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 RPS23P62266 143 aaKnown RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 MRPL54Q6P161 138 aaKnown RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 CA13Q8N1Q1 262 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 GVQW1Q8N7I0 195 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 SLC37A2Q8TED4 501 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TIMD4Q96H15 378 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TMEM140Q9NV12 185 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 LINC01553A4QN01 128 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ZFPL1O95159 310 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 GP1BAP07359 652 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ZNF124Q15973 351 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TEX30Q5JUR7 227 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 RABEPKQ7Z6M1 372 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 MRPL43Q8N983 215 aaKnown RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ZNF296Q8WUU4 475 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ST8SIA1Q92185 356 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 DDA1Q9BW61 102 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 SLC7A10Q9NS82 523 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.28□□□□□ -0.28
SCN3B-201ENST00000299333 NAGKQ9UJ70 344 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 LOC107984156A0A0G2JMH3 177 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 OR5B21A6NL26 309 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ZBTB42B2RXF5 422 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 H3BQ15 152 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 TIMP1P01033 207 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 POU2F2P09086 479 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 Q56UQ5 140 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 SPATA46Q5T0L3 261 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 ARL17AQ8IVW1 177 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 FER1L6-AS2Q96M78 137 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 DEFB127Q9H1M4 99 aa13.28□□□□□ -0.28
SCN3B-201ENST00000299333 HYAL3O43820 417 aaPredicted RBP13.27□□□□□ -0.28
SCN3B-201ENST00000299333 POLR2GP62487 172 aaKnown RBP eCLIP13.27□□□□□ -0.28
SCN3B-201ENST00000299333 UBE2V2Q15819 145 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 DNAJC25-GNG10A0A024R161 153 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 ASPDHA6ND91 283 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 DEFB108AA8MXU0 73 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 B4DEV8 164 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 CXCL13O43927 109 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 LMX1BO60663 402 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 FCGR3BO75015 233 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 RRADP55042 308 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 ALKBH6Q3KRA9 238 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 SAPCD1Q5SSQ6 148 aa13.27□□□□□ -0.28
SCN3B-201ENST00000299333 C11orf94C9JXX5 98 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 MRPS21P82921 87 aaKnown RBP13.27□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 FGF22Q9HCT0 170 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 FZD2Q14332 565 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 FNDC7Q5VTL7 733 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 CPEB3Q8NE35 698 aaKnown RBP13.27□□□□□ -0.29
SCN3B-201ENST00000299333 PP6455Q8WZ26 134 aa13.27□□□□□ -0.29
SCN3B-201ENST00000299333 TARM1B6A8C7 271 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 FBXL6Q8N531 539 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 ADAT3Q96EY9 351 aaPredicted RBP13.26□□□□□ -0.29
SCN3B-201ENST00000299333 A0A1B0GTH9 108 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 M0R1B8 84 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 DHHO43323 396 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 C19orf57Q0VDD7 668 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 KISS1Q15726 138 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 MANBALQ9NQG1 85 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 CBLN4Q9NTU7 201 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 ATP23Q9Y6H3 246 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 V9GYH0 126 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 A0A1W2PR80 420 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 F11P03951 625 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 MELTFP08582 738 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 GALP22466 123 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 CLDN15P56746 228 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 GNB2P62879 340 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 C17orf47Q8NEP4 570 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 OR8A1Q8NGG7 326 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 UFC1Q9Y3C8 167 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM30CPA0ZSE6 113 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 MEX3AA1L020 520 aaKnown RBP13.26□□□□□ -0.29
SCN3B-201ENST00000299333 IER3P46695 156 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 IL10RAQ13651 578 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 C8orf44Q96CB5 159 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 CDCA3Q99618 268 aaPredicted RBP13.26□□□□□ -0.29
SCN3B-201ENST00000299333 KCNK15Q9H427 330 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 OR4C46A6NHA9 309 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 HLA-GP17693 338 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 SMIM21Q3B7S5 101 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 NKAIN1Q4KMZ8 207 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 NSUN5P2Q63ZY6 315 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 NOXO1Q8NFA2 376 aa13.26□□□□□ -0.29
SCN3B-201ENST00000299333 KTI12Q96EK9 354 aaPredicted RBP13.26□□□□□ -0.29
SCN3B-201ENST00000299333 CNRIP1Q96F85 164 aaPredicted RBP13.26□□□□□ -0.29
SCN3B-201ENST00000299333 MFNGO00587 321 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 RPS4XP62701 263 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms