RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 LY75O60449 1722 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 FIGNL2A6NMB9 653 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 DSCR4P56555 118 aaPredicted RBP13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 FUT7Q11130 342 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 DCAF12L2Q5VW00 463 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 C11orf42Q8N5U0 333 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 ASB10Q8WXI3 467 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 CIB3Q96Q77 187 aaPredicted RBP13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 GPR87Q9BY21 358 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 VSIG4Q9Y279 399 aa13.62□□□□□ -0.23
SHROOM4-201ENST00000289292 NUP214P35658 2090 aaPredicted RBP13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 CA6P23280 308 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 LPAR6P43657 344 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ZNF154Q13106 437 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ZNF718Q3SXZ3 478 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 OR2C3Q8N628 320 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 SEC11CQ9BY50 192 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ELF5Q9UKW6 265 aaPredicted RBP13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 DBX1A6NMT0 343 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 WISP3O95389 354 aaPredicted RBP13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ELOVL1Q9BW60 279 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 RAB33BQ9H082 229 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 TMED3Q9Y3Q3 217 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 LOC102723971A0A1B0GUV8 181 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 COL9A1P20849 921 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MNX1P50219 401 aaPredicted RBP13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 LRFN3Q9BTN0 628 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ZNF426Q9BUY5 554 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 KLHDC2Q9Y2U9 406 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 HSBP1O75506 76 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 FAM209BQ5JX69 171 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 NAT8BQ9UHF3 227 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MYO9BQ13459 2157 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MCM3APO60318 1980 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ADAMTS7Q9UKP4 1686 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 C2CD4DB7Z1M9 353 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 FZD5Q13467 585 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ZNF141Q15928 474 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MVB12AQ96EY5 273 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 MENTQ9BUN1 341 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 HSF4Q9ULV5 492 aa13.61□□□□□ -0.23
SHROOM4-201ENST00000289292 ITGBL1O95965 494 aaPredicted RBP13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 DMWDQ09019 674 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 BARX1Q9HBU1 254 aaPredicted RBP13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 POMT1Q9Y6A1 747 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 CRHP06850 196 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 DLK1P80370 383 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 TBC1D26Q86UD7 250 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 WFDC6Q9BQY6 131 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 IL17BQ9UHF5 180 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 LSM2Q9Y333 95 aaKnown RBP13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ATP23Q9Y6H3 246 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 VSIG10L2P0DP72 767 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ERHP84090 104 aaKnown RBP13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 C7orf77A4D0Y5 90 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 M0R143 59 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 SULT1A1P50225 295 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 OR5I1Q13606 314 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 CORO2AQ92828 525 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 MRPL24Q96A35 216 aaKnown RBP13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 TECTBQ96PL2 329 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 COMMD5Q9GZQ3 224 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 PLA2G3Q9NZ20 509 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ST6GALNAC2Q9UJ37 374 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 KLK13Q9UKR3 277 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ZNF32P17041 273 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 HLA-DRB3P79483 266 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 ANKRD37Q7Z713 158 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 RFESDQ8TAC1 157 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 NTNG2Q96CW9 530 aa13.6□□□□□ -0.23
SHROOM4-201ENST00000289292 M0R1X1 148 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 ACAA1P09110 424 aaPredicted RBP13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 CT45A10P0DMU9 189 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 PRSS53Q2L4Q9 553 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 FCGR3BO75015 233 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 TTRP02766 147 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 SUMO3P55854 103 aaPredicted RBP13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 MPV17LQ2QL34 196 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 CBR3O75828 277 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 EML2O95834 649 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 F2RP25116 425 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 GUCA2BQ16661 112 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 TSEN54Q7Z6J9 526 aaKnown RBP13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 COX14Q96I36 57 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 SPRY3O43610 288 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OR2J3O76001 311 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 DRD3P35462 400 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OR5M9Q8NGP3 310 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 TBX21Q9UL17 535 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 FCN1O00602 326 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OPN1MWP04001 364 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OPN1MW2P0DN77 364 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 OPN1MW3P0DN78 364 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 CSN1S1P47710 185 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 LGALS4P56470 323 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 SLC25A42Q86VD7 318 aa13.59□□□□□ -0.23
SHROOM4-201ENST00000289292 SPSB1Q96BD6 273 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms