RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 FAM90A12PA8MX19 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A5PA8MXJ8 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A23PA8MXZ1 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A15PP0C7V4 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A13PP0C7W8 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A14PP0C7W9 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM90A24PP0C7X0 464 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 AGAP20933 346 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 CHATP28329 748 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 GNG2P59768 71 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 SELENOVP59797 346 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ADAM5Q6NVV9 412 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 PLPPR2Q96GM1 343 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ZNF488Q96MN9 340 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 BBC3Q96PG8 261 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAIMQ9NVQ4 179 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ZNF107Q9UII5 783 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ATP23Q9Y6H3 246 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM240BA0A1B0GVZ2 78 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 SERPINE3A8MV23 424 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 CA11O75493 328 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 MT-ND4P03905 459 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 GRPP07492 148 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ACAA1P09110 424 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 MZT1Q08AG7 82 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 C6orf201Q7Z4U5 140 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 C11orf53Q8IXP5 236 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 DMRTC2Q8IXT2 367 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 ZNF808Q8N4W9 903 aaPredicted RBP19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 TAAR3PQ9P1P4 343 aa19.43■□□□□ 0.7
SMARCB1-201ENST00000263121 NBASA2RRP1 2371 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 SHISA9B4DS77 424 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 PRSS44E7EML9 344 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 CDIPTO14735 213 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 RCVRNP35243 200 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 CD200P41217 278 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 ERVK11-1P61568 191 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 ADIPOQQ15848 244 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 PLA1AQ53H76 456 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 GLCCI1Q86VQ1 547 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 TMEM229BQ8NBD8 167 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 OR2Z1Q8NG97 314 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 ITLN2Q8WWU7 325 aaPredicted RBP19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 PLK3Q9H4B4 646 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 PLEKHJ1Q9NW61 149 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 NLKQ9UBE8 527 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 ANAPC10Q9UM13 185 aa19.42■□□□□ 0.7
SMARCB1-201ENST00000263121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 PLSCR5A0PG75 271 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 NAP1L6A6NFF2 107 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 ZG16O60844 167 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 PTBP3O95758 552 aaKnown RBP19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 PGA5P0DJD9 388 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 CACNA1BQ00975 2339 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 NKAPLQ5M9Q1 402 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 Q8IYB0 196 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 CELF2-AS1Q8N7Q2 184 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 NRIP2Q9BQI9 281 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 MMP28Q9H239 520 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 IL36RNQ9UBH0 155 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 RELNP78509 3460 aa19.41■□□□□ 0.7
SMARCB1-201ENST00000263121 IGHV3-64DA0A0J9YX35 117 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 TUBAL3A6NHL2 446 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 PDCD6O75340 191 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 CLDN14O95500 239 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 PRAMEF6Q5VXH4 476 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 FAM58AQ8N1B3 248 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 POU2F3Q9UKI9 436 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 HCFC1P51610 2035 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 NOS1APO75052 506 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 PRKACAP17612 351 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 TAS2R19P59542 299 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 ARFRP1Q13795 201 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 MPV17LQ2QL34 196 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 LINC00596Q86U02 117 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 GVQW1Q8N7I0 195 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 EMG1Q92979 244 aaKnown RBP19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 ELMOD3Q96FG2 381 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 OCSTAMPQ9BR26 566 aa19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 NPDC1Q9NQX5 325 aaPredicted RBP19.4■□□□□ 0.7
SMARCB1-201ENST00000263121 B8ZZF3 427 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 CD3DP04234 171 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 FCER2P06734 321 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 CD3EP07766 207 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 OR4A8P0C604 315 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 AKAIN1P0CW23 69 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 IL13RA2Q14627 380 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 PDCD1Q15116 288 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 MPPED2Q15777 294 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 BEX5Q5H9J7 111 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 PLET1Q6UQ28 207 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 POC1AQ8NBT0 407 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 OR4C16Q8NGL9 310 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 SULT4A1Q9BR01 284 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 DPAGT1Q9H3H5 408 aa19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 RCC2Q9P258 522 aaKnown RBP19.39■□□□□ 0.69
SMARCB1-201ENST00000263121 SIAH2O43255 324 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 OR7C1O76099 320 aaPredicted RBP19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 CD74P04233 296 aa19.38■□□□□ 0.69
SMARCB1-201ENST00000263121 NAT1P18440 290 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 231.7 ms