RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 NDUFA6P56556 154 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 POLR2GP62487 172 aaKnown RBP eCLIP4.16□□□□□ -1.74
USP44-201ENST00000258499 NHLH2Q02577 135 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 PLP2Q04941 152 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 KIAA0141Q14154 515 aaPredicted RBP4.16□□□□□ -1.74
USP44-201ENST00000258499 DHRS11Q6UWP2 260 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 WDFY1Q8IWB7 410 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 TMEM123Q8N131 208 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 OSR2Q8N2R0 312 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 OR2M3Q8NG83 312 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 CPNE4Q96A23 557 aaPredicted RBP4.16□□□□□ -1.74
USP44-201ENST00000258499 TMEM230Q96A57 120 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 DUSP23Q9BVJ7 150 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 PHF7Q9BWX1 381 aaPredicted RBP4.16□□□□□ -1.74
USP44-201ENST00000258499 PLEKHA2Q9HB19 425 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 OCIAD1Q9NX40 245 aa4.16□□□□□ -1.74
USP44-201ENST00000258499 MCTS1Q9ULC4 181 aaKnown RBP4.16□□□□□ -1.74
USP44-201ENST00000258499 CHD9Q3L8U1 2897 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 TRAV20A0A0B4J274 112 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 IGKV1-9A0A0C4DH69 117 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 LOC102725191A0A1B0GVB3 256 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 A0A1W2PPE2 198 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 A0A1W2PR77 199 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 C7orf77A4D0Y5 90 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 ZNF724A8MTY0 619 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 MFNGO00587 321 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 LDLRAD4O15165 306 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 EFNA2O43921 213 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 VAMP5O95183 116 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 OR2C1O95371 312 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 HLA-HP01893 362 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 MELTFP08582 738 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 H2AFB1P0C5Y9 115 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 NAAAQ02083 359 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 SNAI3Q3KNW1 292 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 WIPI1Q5MNZ9 446 aaPredicted RBP4.15□□□□□ -1.74
USP44-201ENST00000258499 KMT5CQ86Y97 462 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 MKXQ8IYA7 352 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 LILRB2Q8N423 598 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 AGBL5Q8NDL9 886 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 OR4A4PQ8NGN8 299 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 HAS2Q92819 552 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 ERGIC1Q969X5 290 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 SAT2Q96F10 170 aaPredicted RBP4.15□□□□□ -1.74
USP44-201ENST00000258499 UCK1Q9HA47 277 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 MYOZ1Q9NP98 299 aaPredicted RBP4.15□□□□□ -1.74
USP44-201ENST00000258499 SLC2A9Q9NRM0 540 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 C19orf12Q9NSK7 152 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 LRFN1Q9P244 771 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 B3GAT1Q9P2W7 334 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 ICE1Q9Y2F5 2266 aa4.15□□□□□ -1.74
USP44-201ENST00000258499 IGKV1D-8A0A087WSZ0 117 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 AQP7P3A6NL99 342 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 TRAPPC2LH3BP13 241 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 HKR1P10072 659 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ZNF708P17019 499 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ECI1P42126 302 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 HAAOP46952 286 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ZNF266Q14584 549 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 C4orf17Q53FE4 359 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 DPPA2Q7Z7J5 298 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ZNF100Q8IYN0 542 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 OR1F12Q8NHA8 337 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 PSMF1Q92530 271 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ZNF837Q96EG3 531 aaPredicted RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 RTBDNQ9BSG5 229 aaPredicted RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 NAA60Q9H7X0 242 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 IFT22Q9H7X7 185 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 RCC2Q9P258 522 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 WNT16Q9UBV4 365 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 R4GN57 208 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 SHANK1Q9Y566 2161 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 LOC390937A0A1W2PQ73 354 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 MEX3AA1L020 520 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 WIPF3A6NGB9 483 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 H7C1Q1 480 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 SLC34A2O95436 690 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 IGHMP01871 453 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 CTSDP07339 412 aaPredicted RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 CCL4P13236 92 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ADCYAP1P18509 176 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 RAB11AP62491 216 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 RPL23AP62750 156 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 NCMAPQ5T1S8 102 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 SHEQ5VZ18 495 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 SLC25A47Q6Q0C1 308 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 LCN15Q6UWW0 184 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 HIST2H3AQ71DI3 136 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 C17orf78Q8N4C9 275 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 CADM4Q8NFZ8 388 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ADAMTS17Q8TE56 1095 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 NAT6Q93015 286 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 IP6K3Q96PC2 410 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 AQP10Q96PS8 301 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 USB1Q9BQ65 265 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 OCSTAMPQ9BR26 566 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 CHST5Q9GZS9 411 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 SLC25A31Q9H0C2 315 aa4.15□□□□□ -1.75
USP44-201ENST00000258499 ESRP2Q9H6T0 727 aaKnown RBP4.15□□□□□ -1.75
USP44-201ENST00000258499 UNKLQ9H9P5 680 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms